| Annotation |
|---|
| Description | jgi|Araly1|892936|Al_scaffold_0006_932 |
| Sequence |
ATGAATTCAG TATCTGCAGA CCAGCGAAAG AGTTTTGGAG ATGATGCTGA TGCTGATCCA ATATGTAACA AAAGCATTAT ATTTCCAAAT AGAGTTGTTG CATTAGCTAA CAGATTCGAG AAGAAAGACC GTATGTCAAA TCTCAAATCC CTACTGATCT GTCTATTCAA GTCGACGACA TTACCTTTAA AAGCACACAA GTTTCCTTTG ATCTCCAAAT GTGGTTACAT GAGCTCTATT GAGCTAAAAC CTTCAACTTC TGAGAATGGA TATCATCTCA AGCTGGAAAA CTTCCCAGGT GGAGCAGATA CATTTGAGAC CGTTCTGAAA TTTTGCTACA ATCTCCCACT GGACTTGAGT CCTCTCAATG TAGCTCCACT AAGATGTGCA TCAGAATACT TGTACATGAC TGAAGAATTT GAAGCCGGGA ATTTAATATC CAAGACAGAA GCTTTCATCA CTTTTGTAGT ACTTTCCTCA TGGAGAGATA CATTCACTGT TCTGAGATCC TGTGCAAACT TATCTCCATG GGTCGAAAAC CTGCAAATCG TAAGGAGATG TTGTGACTTG CTTGCTTGGA AAGCCTGCAA TGATAACAAC AAACCAGAAG ATGTTGTAGA TAGCAATGAC AGATGTTTAT ACAGTGACGT AGCCACCCTT GGCATTGATC ACTTCATGAG GGTTATAACA ACTATGAAAG CAAGACGTGC CAAGCCGGAG ATTACAGGTA AGATCATCAT GAAATATGCA GAGAACTTTT TGCCGATAAT CGATGACGAT TTGGAAGGAA TAAGAGGTTA CGGAGAAAGA ATGGAGGAAA GCAGCAGTTT AGGATGTCAA GAACATAAAG AAACTATTGA AAGCTTAGTC AGTGTACTTC CTCCACAATC TGGAGCAGTC TCATGCCACT TTCTCTTAAG GATGCTGAAA ACAGCAATTG TTTACTCTGC ATCTCCAGCT TTAATATCTG ATCTTGAGAA ACGGGTCGGC ATGGCTTTGG AAGATGCTAA TGTATGTGAC CTCCTGATTC CTAACTTCAA AAATGAAGAT CAGCAGAAAG GAGCAAGGAT TTTCGAGTAT TTCTTGATGC ATGAGCAACA ACAAGTACTA GGAAAGCCAA GCATAACCAA GCTCTTGGAC AATTATTTAG CCGAGATTGC AAAAGATCCA TGTCTACCCA TCACAAAGTT TCAGGTTCTA GCAGAAATGT TGCCGGAAAA TGCTTGGAAA TGCCATGACG GTCTCTATAG AGCAATTGAT ATGTTCCTCA AGGTAACTCA TCCTTCACTA TCAGAGCACG ATAGAAGAAG ATTATGCAAG ACAATGAACT GTGAGAAACT ATCACTTGAT GCATGCCTAC ACGCTGCACA AAATGATCGG TTGCCTCTGA GAACTATCGT CCAGATCAAT ACTCAAGTGC TTTTCTCGGA ACAAAGAAGA AGGAAGAAAA TTCTGAAGGT CGTGAGGATA AACAAATGTC TAGAGATAAT GAAATCAAGA CATGCACTTA AGGAAGAGCT GGAAAATGTG AAGAAGAAGA TGGCAGAGCT TCAGAACGAT TACAATGAGC TTCAACAAGA GTATGAAAAG CTAAGTAGCA AACAGAAGAG CTCACATAAC TGGGGTTTGC GTTGGCAAAA GGTGAAGAAA TCGTTCCAGA TAAAACGCGA AGAAGACGAA ACAAGAGACG GGGCAAGAAG AAGAAGTTCC ACGGGACCAA GAACCAGCCT CAGGAGAAGA ATGTCAATGT CATAA |
| Length | 1755 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3932061.. 3934399 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G10250.1 |
| Description | Phototropic-responsive NPH3 family protein |
| TAIR curator summary | Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves. |
| Alias | [DOT3][DEFECTIVELY ORGANIZED TRIBUTARIES 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 32.187 |
Ahg890648 | proline-rich family protein |
| 43.1509 |
Ahg924996 | Pectin lyase-like superfamily protein |
| 55.0273 |
Ahg483921 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 61.6523 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 73.5867 |
Ahg482667 | xyloglucan endotransglucosylase/hydrolase 32 |
| 81.9756 |
Ahg923134 | Pectin lyase-like superfamily protein |
| 85.0647 |
Ahg472578 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 85.9302 |
Ahg480473 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|