| Annotation |
|---|
| Description | jgi|Araly1|893435|Al_scaffold_0006_1431 |
| Sequence |
ATGAAAATGG CATCATCATC ATCAGCTTTG TCTCTCCCTC TCTCCAACAT CCCAACCTGT AATAAGAAGT CCCAAGAGTT TCAAAAACCG GCTCCTTTAT CCAAATCCAG TCACACACAT AAACCTAGTC TTAAAACCCA AACTTTACAC CACAAACTCA CTAAGAGAAA TTTACTGAGT TTGACTGCCT TGGGATTTAC GTCATCTCTA GGAACTTTTC TTGCTCACCC CGCAAGAGCT GAACCAGAAG CTCCCATCGA AGCCACTTCC AATAGAATGT CGTACTCGAG ATTCCTGCAG CATCTGAAAG AGAATGAAGT GAAGAAAGTT GACTTGATCG AGAACGGAAC CGTTGCGATC GCAGAGATCT CTATTCCAGC ATTAGGAAAG ATCCAGAGGG TTAGGGTTAA CCTTCCCGGT TTACCGGTTG ATCTGGTGAG GGAGATGAAG GAGAAGAACG TCGATTTCGC TGCTCATCCC ATGGATGTGA ATTGGGGAGC TTTCTTGCTC AACTTCTTGG GAAATTTAGG GTTTCCTTTG ATCTTACTTG GCTCTCTGCT TTTAACATCT TCTTCAAGAA AAAATCCTGG TGGACCCAAC TTGCCTTTTG GTCTTGGAAG AAGCAAAGCT AAGTTTCAGA TGGAGCCTAA CACAGGGATA ACGTTCGACG ATGTAGCAGG AGTAGACGAA GCCAAGCAAG ACTTCGAAGA GATCGTTGAA TTCTTGAAAA CCCCAGAGAA ATTCTCAGCT TTGGGGGCTA AAATCCCAAA AGGCGTCTTG TTGACTGGAC CGCCGGGAAC TGGAAAAACT CTCTTGGCCA AGGCTATAGC TGGAGAAGCC GGTGTTCCGT TTTTCTCATT GTCCGGATCG GAGTTCATAG AGATGTTTGT TGGTGTAGGA GCATCTAGGG TTAGAGACTT GTTCAACAAG GCAAAGGCTA ATTCACCTTG TATAGTGTTC ATTGATGAGA TTGATGCTGT TGGGAGAATG AGAGGAACCG GTATAGGAGG AGGAAACGAC GAACGTGAGC AGACACTAAA CCAGATTTTA ACTGAAATGG ACGGGTTTAC GGGGAATACC GGAGTGATTG TAATCGCTGC AACGAACCGG CCGGAAATTC TAGACTCTGC TTTGCTCCGA CCAGGAAGAT TCGACAGGCA GGTTTCCGTT GGTTTACCGG ATATAAGAGG AAGAGAAGAG ATATTAAAAG TTCACAGCAA AAGCAAGAAA CTCGACAAAG ATGTGTCTTT GAGCGTGATT GCCATGAGAA CTCCAGGTTT CAGTGGAGCT GACTTGGCGA ATCTTATGAA CGAAGCCGCG ATTCTCGCCG GAAGAAGAGG AAAAGACAAG ATTACCCTTA CAGAGATTGA CGACTCTATC GATCGAATTG TCGCCGGAAT GGAAGGGACG AAGATGGTCG ACGGTAAAAG CAAAGCGATT GTAGCGTATC ATGAAGTAGG ACACGCAATT TGTGCGACTT TGACGGAGGG TCACGATCCG GTTCAGAAAG TTACGTTAGT TCCTAGAGGT CAAGCACGTG GTCTCACGTG GTTTTTGCCG GGAGAAGATC CGACTTTGGT GTCTAAACAG CAATTGTTCG CTAGAATCGT CGGAGGACTC GGAGGCAGAG CCGCTGAAGA TGTAATTTTT GGAGAACCGG AGATAACCAC CGGCGCCGCC GGTGATCTCC AGCAAGGCAC TGAGACAGCA AGACAGATGG TGACGATGTT CGGCATGTCC GAGATTGGTC CGTGGGCATT AACCGACCCA GCGGTTAAGC AAAACGACGT AGTTCTACGT ATGTTAGCGA GGAACTCCAT GTCCGAAAAA CTCGCGGAAG AAATTGATTC TTGCGTGAAG AAAATAATCG GTGACGCTTA CGAGATTGCA AAGAAGCACG TGAGGAATAA CAGAGAAGCC ATAGACAAGC TTGTTGATGT TTTGTTGGAG AAAGAAACCT TAACGGGAGA CGAGTTCCGA GCAATTCTGT CTGAGTATAC TGATCAACCA TTAAATACCG ATGATAGAGT TCGAATCAAA GACTTGATTA GTGTTTAA |
| Length | 2058 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5966321.. 5968698 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G15250.2 |
| Description | FTSH protease 6 |
| TAIR curator summary | Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. |
| Alias | [ATFTSH6][FTSH6][FTSH protease 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg489869 | HSP20-like chaperones superfamily protein |
| 3.16228 |
Ahg913155 | |
| 4.24264 |
Ahg945273 | heat shock protein 21 |
| 4.47214 |
Ahg496104 | heat shock protein 18.2 |
| 7.4162 |
Ahg485004 | heat shock protein 17.4 |
| 7.74597 |
Ahg336372 | |
| 7.87401 |
Ahg341506 | cell wall invertase 5 |
| 7.93725 |
Ahg493744 | HSP20-like chaperones superfamily protein |
| 8.12404 |
Ahg494919 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
| 8.48528 |
Ahg321490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|