| Annotation |
|---|
| Description | jgi|Araly1|894139|Al_scaffold_0006_2135 |
| Sequence |
ATGTTTGATT GCTTTTTACA ATGTTATTTA GGAGTTGAAG TGAAACCAGG GAACCCTACT AAGGTGACTC CTGAAGAAGA CTGCCTTGTC CACATTTCTC AGGCTTCCCT TGACTGCAAA GTGAAATCTG GAGAATCTGT GCTTTTGACT GTCACTGTTG ATGGGACTAA GCTTGTTATT GGAACACTTT CACAAGAGAA GTTCCCTCAG ATTAGCTTTG ATTTGGTCTT TGAGAGAGAG TTTGAGCTTT CCCACAATGG TACCAAAGGA ACCGTCCACT TCATTGGCTA CAGATCCCCC AACATCGACC ATGAGGACTA CACTAGTTCA GAAGAGGAGG ATGTTCCTGA AGCTGTCCCT GCCCCTGTTC CTGCAGCTGT TGCTGTCAAT GGAAGTGCTG GAGCAGCTGC TTCGAATGTT GTCAAGGCTG ACTCAAAGCC AAAGGCCAAG CCTGCAGAAG TGAAGCCTGC AGAAGTGAAA CCTGAATCAG AAGATGATGA GGATTCCTCT GACGAGGAAG ATGAGTCTGC TGATGATGAT GACTCTGAGA AAGGAATGGA TGTTGACGAG GATGATTCTG ATGATGAGGA GGATGAATCA GAGGAAGAAG AAGAAGAGAC TCCCAAGAAG CCTGAGCCAA TCAACAAGAA GAGGCCTAAT GAATCTACAT CCAAAACACC TGTCTCTGGA AAGAAGGCAA AACCAGCAGC AGCACCAGCA GCTACTCCTC AGAAGACAGA AGAGAAGAAG AAAGGAGGAC ACACAGCCAC ACCACACCCA GCTAAGAGGG GTGGAAAGTC TCCTGTGAAT GCTAACCAGA GCCCCAAGGC TGGAGGTCAA TCATCCGGTG GTAACAAGAA ATTCAATTCG GGCAAACAAT TTGGTGGTTC TAACAACAAG GGCAAGGGCA AGGGTAGAGC TTAA |
| Length | 924 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9005656.. 9007327 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G22650.1 |
| Description | histone deacetylase 2B |
| TAIR curator summary | Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation. |
| Alias | [ATHD2][ATHD2B][HD2][HD2B][HDA4][HDT02][HDT2][ARABIDOPSIS HISTONE DEACETYLASE 2][HISTONE DEACETYLASE 2][histone deacetylase 2B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.34847 |
Ahg476596 | NAP1-related protein 1 |
| 9.64365 |
Ahg496177 | GTP binding Elongation factor Tu family protein |
| 11.0454 |
Ahg906639 | Ribosomal protein L2 family |
| 12.6886 |
Ahg488236 | Transducin/WD40 repeat-like superfamily protein |
| 14.0712 |
Ahg487950 | DEAD/DEAH box RNA helicase family protein |
| 15.3297 |
Ahg470815 | ribosomal protein L29 family protein |
| 16.6132 |
Ahg493903 | prohibitin 3 |
| 17.2337 |
Ahg484880 | histone deacetylase 3 |
| 18.735 |
Ahg941581 | Ribosomal protein S8e family protein |
| 18.7617 |
Ahg488362 | Ribosomal protein S4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|