Detail



ID : Ahg488236

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488236|fgenesh2_kg.6__1370__AT5G14050.1
Sequence
TTTTTTTGGA AAATGAAATT GTAAAACCCT AAAAAATCCA ACCAGAAGAA AAGCTCTCTC GCCGCTACAA GGTTTCTCTG CTCGTCAACG TTTTCTGGAT TTGTGGTATT GAAAGATGAG CTTATCTCAG AATGCTCCGA CAAGTAAGGC TAATAAAAGA GAGGAGCTCA AGAAACAGTA CACAGATGGG GAAGAGATTG GGTCCGATGA TGATCTCACT AGGGGAAAGA GAAGAAAGAC AGATAAGGAG AAGGAGAAGC TACAAGAATC GGAGGTGGTT GAAATGAAAA AGCTTGAGAA TTTGATATTC GGGTCACTCT ACTCACCTGT TACGTTTGGT AAGGAAGAAG AAGAAGATGG TTCGGCTTTG TTTCATGTAG ACCGTTCTGC TGTGAGGCAG ATTCCGGATT ACGAGGATGA TGATGATGAA GAGAATGGTC AAGCTGTGGG AATTAGAAAG GGAGAAGCCG CCTGGGAGGA TGAAGAAGAG AAACAGATAA ACATTGATAT AGCTAGTGTC AACCGTCTGA GGAAGCTAAG GAAAGAGGAG AATGAGGGCT TGATCTCTGG GTCTGAGTAC ATTGCAAGGC TGAGGGCTCA TCATGCTAAG CTAAACCCGG GGACTGATTG GGCTCGGCCA GATTCTCAAA TCATTGATGG AGAGTCTTCA GATGATGATG ATACCCAGGA TGGAGGAGTT GATGATATCC TCCGGACGAA TGAAGATCTT GTGGTGAAGT CCCGTGGTAA CAAGCTGTGT GCTGGTCGTC TTGAATACTC AAAGCTTGTG GATGCCAATG CAGCGGATCC TTCAAATGGC CCGATAAACT CTGTCCACTT CCATCAGAAC GCTCAGCTGC TTCTCACTGC TGGATTGGAT CGACGGTTAA GGTTTTTCCA GATTGATGGA AAGAGGAACA CCAAGATCCA GAGCATTTTT CTTGAGGACT GTCCCATTCG TAAAGCGGCT TTCTTGCCCA ATGGCTCTCA GGTCATTGTC TCCGGAAGAA GAAAGTTCTT TTACAGCTTT GATTTGGAGA AGGCAAAGTT TGACAAAATT GGCCCTTTGG TTGGTAGAGA GGAGAAAAGC TTGGAACAGT TTGAGGTGTC ACAAGACTCT AACACCATAG CTTTTGTTGG CAACGAAGGT TATATCTTAC TTGTGTCTAC AAAAACAAAA GAGCTGATAG GAACCCTAAA GATGAACGGT TCAGTTAGGT CCTTAGCATT TAGTGATAAT GGAAAGCATT TGCTGAGCTC AGGAGGTGAT GGGCAAGTCT ACGTCTGGGA TCTGAGAACA ATGAAATGCT TATACAAAGG CGTGGATGAA GGCAGCACTT GTGGCACTTC TCTTTGCAGT TCGCTAAACG GAGCATTGTT TGCCTCTGGA ACCGATAGAG GAATCGTAAA CATTTACAAG AAATCTGAGT TTGTGGGAGG CAAGAGAAAG CCGATAAAGA CAGTGGACAA TCTCACTTCC AAGATAGATT TCATGAAGTT CAACCATGAT GCTCAGATTC TAGCTATAGT CTCTACAATG AACAAAAACA GCGTAAAGCT AGTCCATGTT CCATCCCTAA CCGTCTTCTC AAACTGGCCG CCACCCAACA GCACAATGCA TTACCCTCGC TGCCTAGACT TCAGCCCCGG AAGTGGCTTC ATGGCTATGG GAAACGCCGC CGGAAAAGTT TTGCTGTATA AACTGCATCA TTACCAGAAT GCTTGAAGTG GTCTTAGCAA GGGCAGTTTT GGGATTGTTG TGTTTTATCC TTTATTTTGT CGCAAGTACT ACTATGTTAT CAATTTTCCT ATCCAATTTT CGATCAATGA AAAATTTTCT TTCTGATT 
Length1848
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5467619.. 5469747
Download Sequence
A.thaliana
AGI-codeAT5G14050.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.2474 Ahg492297 FK506 BINDING PROTEIN 53
12.6886 Ahg894139 histone deacetylase 2B
16.1864 Ahg311847 GTP binding Elongation factor Tu family protein
17.6635 Ahg496396 DEAD box RNA helicase (PRH75)
27.3861 Ahg909633 Ribosomal protein L30/L7 family protein
28.9828 Ahg496951
33.6601 Ahg486363 ARM repeat superfamily protein
39.37 Ahg487312 Surfeit locus protein 6
41.7493 Ahg949102 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
42.4853 Ahg940041 DnaJ domain ;Myb-like DNA-binding domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression