Detail



ID : Ahg894157

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894157|Al_scaffold_0006_2153
Sequence
ATGGAGGACG ATGAAGCGAA GCAGCGAAGA AAACTTGAAG AAGAAGAAGA AGATTTTGAT GAACGAAGAG AAGAAATAGA AAACGATTTT CCCTCACATC ATCCTCCTCC TCCGCCTGAT GAGTTCTTTG ACATTTCGAC TACAGTTGAT CCTAGCTATG TTATTTCACT GATAAGGAAA CTCCTTCCTG TTGATTCGGG TACTGACGAA CGACATAATC ATCATATGAA TGCGGATAAT GTGGTTCACG GTGTAGTAGC TGTATCTAGA AACACTTCCA ATGGTGATCC AGAGAGCATG GACATTGAAG ATAATCATAA TGAATCCACT TCCGAGGTGA GGGGCACGGT CAGTTCATGT CGGGAGCCGG GAATGCTAGG CGGGTCATCA GTGGAAGAAG CATGGGAAGA TCATGGTTGT GTTTTGTGGG ATCTTGCCGC TAGTAGAACT CATGCTGAGC TAATGGTACA GAACCTAATT TTAGAAGTGC TTCACGCAAA CCTTATGGTT TCAACATCTG CCCGCATTCG AGAAATTTCT CTCGGGATTA TTGGGAACCT TGCTTGCCAT GAAGGTTTGT TGAAACATAT AGAGTCTACA GCTGGACTCG TAAATATACT CGTGGGGCAG TTGTTTCATG ATGATACCCA ATGCCTAAGT GAAGTTTGCA GGATATTCAC TACAGGACTC TATGGGGCTG GGTGCACTTT TTGGGCTGAT TGTTTGAAGT CTGATGATAT ACTTCGCCGT ATTTTGTGGA TTGCGGAAAA TACCTTGAAT CCTCATCTTA TTGAAAAGAG TGTAGGGCTA TTGTTAGGCA TCATAGAAGG TCAACCAGAG ATTGAGCAGC TATTGATCCC CCCACTAATG AATCTGGGTT TAACGGGTGT CTTGATCAAT CTTCTTTCCG TTGAAATGAG CAAGTTGACT AAAGAGAGAA TTCCAGAAAG GTACCCCGTC CTTGAAATTA TTCTCCGAGC TATTGAAGCC CTTTCTGCTT CAGATAGCCA TTCTAAAGAG ATTTGCTCTA GCAAAGAACT TTTTCAACTA GTCTGTGATC TTTTGAAACT TCAGGACAAA ACCGAGGTGG CAACATCTTG TGTTACTGCT GGAGTTTTAA TCGCAAATAT GCTGTCGGAA ACAGTCGTTT TCATTCCAAA AGTATCGCAA GATTTTTCTT TCTTGGAAGG TTTATTCAGT ACTTTACCAT TTGCTTCGGA TGATGTAGAA GCAAGAAGAG CTCTTTGGAA TGTTATTGCG AGATTACTTG CCAGAGTTAA TGAATCCGAG ATAAACACAT TCTGTCTGAG TCAGTACATA TTGGTTTTGT TAAGCAAAGC AGATATTATA GAAGATGATC TTCTTGATAC CCAACTAGAA GATTCAAACG AGGAGTCCCA AAACTCATTC CCTTCCCAGA TAAAGTCAAG CGCGCGAACA ATTGCTCGAC AACAGATACG GAAGATTGAA TCGATATTGA ACAATTGGAA TGTTCGCAAG GAGGATTTCC AGGAGGAAAC AGTGAACGAG AATTGCTCTA TAATCCTAGC TGATGTTAAA AGGCTATCCG ATTGCTGTCA CAGATATATC AAGTAA 
Length1596
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9121428.. 9124508
Download Sequence
A.thaliana
AGI-codeAT5G22820.2
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.8745 Ahg322057 Endonuclease/exonuclease/phosphatase family protein
17.9722 Ahg894331 Transducin/WD40 repeat-like superfamily protein
41.7133 Ahg942029 Protein of unknown function (DUF1162)
57.1402 Ahg478080 Protein of unknown function (DUF3755)
60.7454 Ahg355810 RNA-binding (RRM/RBD/RNP motifs) family protein
74.1957 Ahg355148 calmodulin binding;transcription regulators
76.8375 Ahg471173 Cysteine proteinases superfamily protein
83.6182 Ahg487743 Vacuolar sorting protein 9 (VPS9) domain
87.0172 Ahg477366 Adenine nucleotide alpha hydrolases-like superfamily protein
89.7552 Ahg942945 SPA1-related 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression