Detail



ID : Ahg894337

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894337|Al_scaffold_0006_2333
Sequence
ATGATGCAAA TTTTTGTGAA AACACTCACT GGCAAGACCA TTACTCTCGA GGTTGAGAGC TCTGACACCA TTGACAATGT TAAGGCAAAG ATTCAGGACA AGGAAGGGAT TCCTCTAGAC CAGCAAAGAT TGATCTTCGC CGGAAAACAG CTCGAAGATG GCCGTACTTT GGCCGATTAC AACATCCAGA AAGAATCAAC TCTCCACTTG GTTCTTCGTT TAAGAGGTGG TATGCAGATC TTTGTGAAGA CTTTGACTGG CAAAACAATC ACTCTCGAGG TTGAGAGTTC AGACACTATT GACAATGTTA AAGCTAAGAT CCAAGATAAA GAGGGAATCC CACCGGACCA GCAGAGACTT ATCTTCGCTG GGAAACAGCT TGAAGATGGT CGTACACTCG CTGACTACAA TATCCAGAAA GAGTCTACCC TCCATTTGGT GCTTCGTCTC AGAGGTGGTA TGCAGATTTT CGTGAAGACC CTTACCGGCA AGACCATCAC TTTGGAGGTT GAGAGCTCAG ACACGATTGA TAATGTCAAG GCTAAGATTC AAGACAAGGA AGGGATCCCA CCGGACCAGC AGAGACTTAT CTTCGCTGGG AAACAGCTTG AGGATGGTCG GACACTTGCG GATTACAACA TCCAAAAAGA GTCTACACTC CATCTTGTGC TTCGTCTCCG TGGTGGTATG CAAATCTTTG TGAAGACCCT TACCGGAAAA ACCATTACTC TGGAGGTTGA GAGCTCAGAC ACAATCGATA ATGTCAAGGC TAAGATTCAG GACAAGGAAG GGATCCCACC AGATCAGCAG AGACTCATCT TCGCTGGTAA ACAGCTTGAG GATGGTCGGA CTCTTGCGGA TTACAATATT CAGAAGGAAT CAACCCTTCA CCTTGTGTTG CGTCTTCGTG GTGGCATGCA AATCTTTGTG AAGACTTTGA CAGGCAAGAC TATTACTTTG GAGGTTGAGA GCTCAGACAC TATTGATAAC GTCAAGGCCA AGATTCAGGA CAAGGAAGGG ATCCCTCCGG ACCAACAGAG ACTCATCTTC GCTGGGAAAC AGCTTGAGGA TGGTCGGACT CTTGCAGATT ACAACATCCA GAAGGAGTCG ACTCTTCATT TGGTTCTTCG TCTTCGTGGT GGAAGCTTCT GA 
Length1152
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10047796.. 10048945
Download Sequence
A.thaliana
AGI-codeAT5G20620.1
Descriptionubiquitin 4
TAIR curator summaryencodes a ubiquitin polyprotein.
Alias[UBQ4][ubiquitin 4]
Gene coexpression
MR
MR Locus Description
9 Ahg483043 Clathrin light chain protein
10.9087 Ahg480054 ribosomal protein L5
16.6132 Ahg485677 Ribosomal protein L24e family protein
20.3961 Ahg492815 small nuclear ribonucleoprotein associated protein B
23.6432 Ahg495939 regulatory particle triple-A ATPase 3
24.2899 Ahg927805 NADH-ubiquinone oxidoreductase-related
26.0768 Ahg488410 reversibly glycosylated polypeptide 2
27.8388 Ahg493925 20S proteasome beta subunit PBB2
29.3258 Ahg358053
31.225 Ahg478235 Ribosomal protein L10 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression