Detail



ID : Ahg894427

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894427|Al_scaffold_0006_2423
Sequence
ATGTTCAAGG TTGCAAGAGC ATCACAATAT TTGGCCATCA CCGGTGGTGG GATCGAAGAT ATCAAGCTCT CGAAGAAATC ATGGGTGCTT CCATGGCAAA AATGCACCGT TTTCGACGTG TCTCCAGTGA ACTACACTTT CAAAGTCCAG GCTATGAGTG CAGAGAAGCT ACCTTTTGTT CTTCCTGCTG TCTTCACTAT CGGCCCTCGT GTTGATGACA CTGAAGCACT TATTCTGTAC GCTAGGCTGA TTTCGCCTCA CGACAAACAG TCAAATCATG TCAATGAGCT TGTTGAAGGT GTTATTGAGG GAGAGACTCG TGTTCTCGCT GCTTCCATGA CCATGGAAGA GATCTTCAAA GGGACAAAGG AGTTTAAGAA GGAGGTGTTT GATAAGGTTC AACTAGAATT GGACCAGTTT GGACTCGTAA TCTACAATGC CAACGTCAAA CAGCTGGTTG ACGTGCCCGG ACATGAGTAC TTCTCTTACT TGGGTCAGAA AACCCAAATG GAAGCGGCCA ATCAGGCCAG GATCGATGTG GCTGAGGCCA AGATGAAGGG AGAGATCGGT GCCAAGGAAC GGACAGGGCT TACGTTACAG AACGCAGCGA AAATTGACGC GGAGTCAAAG ATCATATCGA TGCAGAGGCA AGGAGAAGGG ACAAAGGCGG AGATCAAAGT GAAGACTGAG GTAAAAGTGT TTGAGAATCA GAAGGAAGCT GATGTAGCTA AGGCCAACTC GGAGCTTGCC ATGAAAAAAG CTGCTTGGAC CAAGGATGCT AAGGTTGCTG AGGTTGAAGC AACCAAGGCT GTGGCTTTGA GAGAAGCTGA GCTTCAGACT CAAGTTGAAA AAATGAACGC TTTGACTCGA ACAGAGAAGC TCAAGGCCGA GTTCCTTAGC AAAGCCAGTG TTGAGTATGA AACCAAGGTT CAAGAAGCAA ATTGGGAATT GTACAATAAG CAGAAGCAAG CAGAGGCGGT TTTATACGAG AAGCAAAAGC AAGCTGAGGC ACAGAAAGCT GAAGCAGACG CAACGTTCTA CTCAAAGCAA AGAGAAGCAG AGGGACTTGT TGCTCTAGCC AGTGCTCAAG GAACATATCT CAGAACCCTC CTAGACGCAG TTCAGAATGA CTATTCTTGC CTTAGAGACT TCTTGATGAT TAACAATGGC ACTTATCAGG AGATCGCTAA GACTAACGCA CTTGCGGTCA GAGACTTGCA GCCCAAGATT AGCGTTTGGA ACCACGGTGG AGAACAGGGG ATTGGTGGTG CTGGTGGGAG TGGGAATGCT ATGAAGGATA TAGCTGGACT TTACAAGATG CTGCCTCCAG TTCTTGATAC GGTTTACCAG CAGACTGGGA TGCAGCCACC GGCTTGGATC GGTACTCTAA GCAAGTGA 
Length1398
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10598217.. 10599759
Download Sequence
A.thaliana
AGI-codeAT5G25260.1
DescriptionSPFH/Band 7/PHB domain-containing membrane-associated protein family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg909804 plant U-box 54
5.2915 Ahg478321 monodehydroascorbate reductase
7.48331 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
8.7178 Ahg475850 Eukaryotic aspartyl protease family protein
9.48683 Ahg934718 Uncharacterised protein family (UPF0497)
10.247 Ahg480771
10.583 Ahg493466 XB3 ortholog 4 in Arabidopsis thaliana
11.0905 Ahg937488 Calcium-binding EF-hand family protein
11.3137 Ahg481397 receptor like protein 20
11.4891 Ahg484989 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression