Detail


ID : Ahg909804

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909804|Al_scaffold_0001_58
Sequence
ATGGAAGACG CCATTTATGT TGCAGTGAAT CAAGATGTTC GAGAAAGTAA AAAAACTTTG TTATGGACAT TGAAAAATCT TCAAGTCAAG AAGATTTTCC TTCTTCATGT TCATCTTCCA TTTTCGTTGA CCACTTCCTC AAGTAGGTTT GAACAAAGTG AGATCGATGC AATCCAAGAT TCAGAACTGA ATACTTCAGT TAATAGCCTC TACAAGTACC GTGATATCTG CATAAACAAA GGAGGGGTTA ATGAAGAAGA TGTGGATACA TCATTGATCT CAGGACATGA TGTGGGGGAA GGGATTGTGG AACTCATGTA TCAAAACAAT ATCACGAAGC TGGTTATGGG AGCAGCAGCT GATTCTCACT ATTCCAGGGG AATGTCCATC ACATCTAGGA AAGCAGAGTA TGTGAGTCAA CATGCACCTC GTAGCTGTAA AATGTGGTTC ATCTGCAAGG GGAAACTCAT CAAGAAAAGA GAAAGAAGTT TCGACATCGG GAATCCATCA GACTCATTCT CAGAATTCTC TACTTCTGCT GAGAAACCAA TTAGCAAAGG AAGAAGAAGG GATGAGGAAT ATGAAACAGA GTCACCTAAA GAACATCCAG TTTGGATACT AGAACCCGAG GAATCACCAA AGAAAGGAAA GAAGGAACCT GCAGAGAAGT CAAAAAGCAA TGGGAGCGAT GAAGACTCAC GCCTCGAAGA TTTCAAGTGT CCCATTTCAA TGGAGATAAT GCGAGATCCT CATGTGGCTG CTGATGGTTT CACCTACGAG GCAGAGGAAT TCAGAAAGTG GCTAAGGTCA GGAGGTCGAA CCTCGCCAAA GACAAACAAG CCGCTTGAGA ATCATAATCT TGTTCCAAAT CACACTCTTC GTATAATCAT TAAAGACTGG CTCGAGAAGA ACCCAAATCA TAAACATTGA
Length930
Protein Sequence
Protein Residue
Map Locationscaffold_1: 212850.. 214956
Download Sequence
A.thaliana
AGI-codeAT1G01680.1
Descriptionplant U-box 54
TAIR curator summary
Alias[ATPUB54][PUB54][PLANT U-BOX 54][plant U-box 54]
Gene coexpression
MR
MR Locus Description
1 Ahg356293
1.41421 Ahg894427 SPFH/Band 7/PHB domain-containing membrane-associated protein family
2.23607 Ahg947849 Calcium-binding EF-hand family protein
3.4641 Ahg471490 Regulator of Vps4 activity in the MVB pathway protein
4 Ahg475850 Eukaryotic aspartyl protease family protein
5.91608 Ahg484989 C2H2 and C2HC zinc fingers superfamily protein
6 Ahg480771
6.245 Ahg918888 Chitinase family protein
6.48074 Ahg491132 LYS/HIS transporter 7
10.9545 Ahg472361 Protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression