Detail



ID : Ahg894853

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894853|Al_scaffold_0006_2849
Sequence
ATGTCAAGGA ACGAATCCAC CGCCGTCGTC TCTGTTGTCA CGCCGGAGAA GACCATTATT TCCAAATGCG GCGATTCACG TGATATGCTT TGCCGTGACG GCGTAGCCAG TCCTCTCTCC GTGGATCACA AGCCGGATCG ACCCGATGAA TTGATTCGGA TCCAGCAAGC AGGCCATATT TACTTGAAAC CATATGACGA CGACGACGGA TCCGAAATGA TGGACTATGG GTCGTTGTAC CAAATGAGAC GGCGTTATGG CGTGGCTCGC GTGTGCCCTC GAGGTACTGG TAGAGCGGAT GGTGATGATT CCGTTGCAGC AGCGACACAC AATGCTTGCT CTGATGCTTC GTTGCTATTA ACGAAGTTGG CTCTAGCAAG ACCGACCTTC GATAACGTGA GTGTTGTGGT CCTGTGGTTG ACAGGAGGAA GAGGAGGAAT AATCAACCAT CGTCATAATA TTTAG 
Length465
Protein Sequence
Protein Residue
Map Locationscaffold_6: 13696106.. 13696868
Download Sequence
A.thaliana
AGI-codeAT3G11410.1
Descriptionprotein phosphatase 2CA
TAIR curator summaryEncodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.
Alias[AHG3][ATPP2CA][PP2CA][ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA][protein phosphatase 2CA]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg920348 myo-inositol oxygenase 1
15.9687 Ahg902358
31.289 Ahg896393 pyruvate orthophosphate dikinase
33.541 Ahg933695
35.0999 Ahg926061 glycine-rich protein
38.9615 Ahg925585
39.4968 Ahg941495 nudix hydrolase homolog 24
60.407 Ahg497295 Protein of unknown function (DUF640)
62.9285 Ahg922788 F-box family protein
66.5207 Ahg891600
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression