Detail



ID : Ahg896393

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896393|Al_scaffold_0005_359
Sequence
GTTCTTGATC AGCAAGGTGT AGGGCAATTG ATCAAGATGG CGACAGAAAA AGGACGAGCA GCTATGCCTA GCCTCAAGGT TGGGATATGT GGAGAACATG GAGGAGATCC ATCGTCTGTG GGATTCTTTG CTGAAGCAGG ACTTGACTAT GTCTCTTGTT CTCCTTTCAG AGTTCCAATT GCAAGGCTTG CAGCTGCTCA AGTTGTTGCA TGA 
Length213
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2118521.. 2118841
Download Sequence
A.thaliana
AGI-codeAT4G15530.5
Descriptionpyruvate orthophosphate dikinase
TAIR curator summaryEncodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.
Alias[PPDK][pyruvate orthophosphate dikinase]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg479088 HPT phosphotransmitter 4
22.891 Ahg925479 chloroplast ribosomal protein S14
27.8209 Ahg474716 dehydrin family protein
29 Ahg475341 thioredoxin H-type 7
31.289 Ahg894853 protein phosphatase 2CA
36.6333 Ahg932721
39.0384 Ahg925059 other RNA
42.8952 Ahg492324 Fe superoxide dismutase 1
57.7927 Ahg925483 photosystem II reaction center protein M
61.8385 Ahg476224 MLP-like protein 43
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression