Detail



ID : Ahg895358

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895358|Al_scaffold_0006_3354
Sequence
ATGGTGAACG CGATCGCGAT GGCTTGTGTA ATCGCCGGAG TTGTTATCGG AATGTTAAAC GAAGTCGACG GAATCCAGAT TTTATCTAAA TCAAAGCTGG AGAAGTGTGA GAAAACATCC GATTCAGGGA ATCTAAATTG TTCAACTAAG ATCGTCTTGA ATCTCGCTGT TCCCAGTGGA TCCAGTGGAG GAGAGGCTTC GATCGTAGCG GAAATCGTGG AAGTTGAAGA TAATTCGAGT AGTAATATGC AAACTGTACG GATTCCACCG GTGATTACAG TGAATAAATC TGCAGCATAT GCTCTCTATG ATCTTACTTA CATTAGGGAT GTACCTTACA AGCCTCAAGA GTATAGCGTT ACGACTCGAA AGTGTGAACC TGATGCTGGA CCTGATATTG TACAAATATG TGAGAGGTTG CGAGATGAGA AGGGCAATGT TTTGGAGCAG ACTCAACCTA TATGTTGTCC ATGTGGACCG CAACGAAGAA TGCCTTCATC TTGTGGAGAT ATTTTTGATA AGATGATAAA AGGGAAGGCA AATACCGCTC ATTGCCTTCG TTTTCCAGGT GACTGGTTCC ATGTTTTCAG CATTGGACAA CGGTCACTAG GATTTAGTGT GCGGGTTGAG TTAAAAACAG GAACTAGAGT TTCAGAAGTG ATCATTGGTC CTGAAAATAG GACAGCTACT GCAAATGATA ATTTCCTCAA GGTTAATCTC ATAGGAGACT TTGCTGGTTA CACAAATATT CCTTCTTTCG AGGACTTCTA TCTTGTAATC CCAAGAGAGG CGGCTGTAGC GGGACAACCA GGGAATTTAG GCGCAAATTA CTCAATGTGG ATGCTCCTTG AGAGATTGAG ATTTACATTG GATGGCTTAG AATGTAATAA AATCGGTGTT GGCTATGAAG CCTTTAATAG TCAACCAAAT TTCTGCTCTT CACCATATTG GAGTTGCTTG CATAATCAAC TATGGAACTT CCGTGAGGCA GATATTAACC GGATCAACCG AAACCAACTT CCTTTATATG GACTGGAAGG AAGATTTGAG AGGATCAATC AACATCCAAA CGCGGGGCCT CACTCGTTCT CCATTGGAGT CACAGAAACA CTTAACACAA ATCTGATGAT AGAACTAAGA GCTGATGATA TTGAATACGT TTTCCAGAGG AGCCCTGGTA AGATCATAAA CATAGCTATA CCGACATTCG AGGCACTTAC ACAATTCGGA GTTGCTGCAG TTACAACCAA GAATACAGGT GAAGTAGAAG CATCTTATAG CTTAACGTTT GATTGCTCCA AAGGCGTGGC TTTTGTTGAG GAGCAATTCT TCATTATAAA ACCAAAAGCG GTTACAACTC GATCTTTTAA GCTGTACCCG ACGAAAGATC AGGCTGCAAA ATATATATGC ACAGCTATAC TCAAGGATTC TCTGTTCAGC GAAGTAGACA GAGCCGAGTG TCAATTCAGC ACAACGGCTA CTGTACTCGA CAATGGAACT CAGGTTACTA ATCCATTTCA AATTCCAGAG ACTCGTCCTA AAGGTTTCTT TGATTCGATT AGGATAATGT GGACGAAACT CATCAATGGT TTAGTCGATT TCATCACCGG AGACACTTGC AGAAACAAAT GCTCGAGTTT CTTCGACTTC AGCTGCCACA TTCAATACGT TTGCTTGAGC TGGATGGTTA TGTTCGGCCT TCTCCTCGCT CTCATCCCAA CCACTTGTGT CCTTCTCTGG CTCTTGCACC AAAAGGGACT CTTTGATCCA TTCTACGATT GGTGGGAAGA TCATTTCGAC TTAGACCATC ATCGGAGATT GTTACCACCC ACTAGAGAAG ACGCTATAAA CCGCCGTCAT CACCATCACC ATCGCCAGCA TCGGCATGGT GTCAAAACTC ATAATCATCA TCGTAGAACA CACAAGAGAC ACAAACACCA CCATAACCAA GACGACGACG TTTTGCAGAA TATGCTTGAA CGTGACCACA ACGAGTCTCA CTACTACCAC CAACTTCACC GAGTCCATAA AGATAGCAAA CAGAAGCAGC GTAGACGAGC CAAGCACGGG ATCGTCCTGC CACGTGATGT GCACGTGGAT AGACGGAAGA GACAAAGGCT ACGTGAGAGT TAA 
Length2133
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20184929.. 20188507
Download Sequence
A.thaliana
AGI-codeAT4G11720.1
Descriptionhapless 2
TAIR curator summaryEncodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane.
Alias[GCS1][HAP2][GENERATIVE CELL-SPECIFIC 1][HAPLESS 2]
Gene coexpression
MR
MR Locus Description
1.41421 Virus1122
3.74166 Ahg938069 serine carboxypeptidase-like 38
5.74456 Ahg920806
6.32456 Virus0651
8.48528 Ahg942214
9.48683 Ahg358516 Plant thionin family protein
9.48683 Virus0233
11.225 Ahg945275
12.3288 Virus1524
14.1421 Ahg930149 SKP1-like 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression