Detail



ID : Ahg895488

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895488|Al_scaffold_0006_3484
Sequence
ATGGCGGGTC GACTACAATC TCACCAATTA CCAAGTGGAC TCTACGTTTC AGGTAAACTC GAACAACCCA AAGAACGACC ACCGACAATG GCGGCTCGTG CTATGCCTTA CACCGGAGGC GATATCAAGA AATCCGGCGA GCTCGGAAGG ATGTTCGACA TCTCCGTCAA TGATCCCACC TCGTTTCAAA GACCTCCGTC GATTTTCTCC GGCGAATCAG CTAGACAGCC ACCGCCACCG CCACGTGTCC CCTCCGCTTC GTCTTCGAAT CCGAATAGTG GATCCGTTCG ATCCGGATCT CAATCGGGTC TAATTAGAAA ATCTTCAGGT CCTCTTTCAC AGCTTCAACC CACCGGTTTA ATCACCTCCG GTCCGCTTAA TTCGTCCGGT CCAATTGGGT CCGGGTCAAG AAGGTCGGGT CAGATTGATC AACATCATCA AACGAGTAAT ACAAGATCGA GCAAACCCAA ATATGGATCG GCGGTTACGG TTTTGAATTC GGATCCGATT CGGGTCGGGT TTAGAGTACC AAAAGCTGTG ATTTGGGCAG TGATTGTAGT TGCAGGGATG GGTTTACTAA TTGGTGCGTT TTTATCTGTG GCGGTGAAGA AGCCATTAGT TGTGGTGGTG ATTGTGGCGG CCATTTTTCC GGCCGTCGTG GTTTTTGTGT GGAATTGTAT TTGGAGAAGA AGAGGGTTAA TGGGTTTCAT CAAGAATTAT CCAGATGCTG TGATTAGAGG CGCCATTGAT GGACAGTTCA TCAAGGTCAC AGGGGTTGTA ACATGTGGAA GTATCCCGCT TGAGTCGTCA TACCAAAGGA TACCGAGATG TGTTTATGTA TCGACGGAAT TGTATGAGTA CAAAGGTTTT TGTGGGAAAT CCGCTAACTT GAAACATAGA TGTTTTTCGT GGGGATGCAG ACATGCTGAG AGATATGTAT CGGATTTTTA CATTTCGGAC TTTCAATCCG GATTGCGAGC ACTTGTTAAA GCAGGATATG GATCAAAAGT TTCTCCAATT GTCAAACCAA CAACAGTAGC TAATGTAACC TCACAAACTA AGGATTTATC TCCAAGCTTT CTACAATGGT TAGCGGATCG CAACCTTTCC AACGATAACT GTGCCATGCG TCTCAAAGAA GGATACATAA AAGAAGGGAG CACCGTAAGC GTGATGGGAA TGGTGAGGCG ACACGACAAT GTTCTGATGA TCATTCCTCC TGCCGAATCA ATCGCCACTG GCTGCAAATG GTGGCGTTGC CTTCTCCCAA CTTATGTGGA TGGCCTTATC ATTACTTGTG ATGAGAACCA AAATGCTGAT GTCATTCCTG TCTGA 
Length1335
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20928636.. 20930977
Download Sequence
A.thaliana
AGI-codeAT4G22290.1
DescriptionUbiquitin-specific protease family C19-related protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.0868 Ahg496807 Leucine-rich receptor-like protein kinase family protein
34.8712 Ahg945914
46.0869 Ahg496959 RNA binding;GTP binding
47.6865 Ahg476070 DHHC-type zinc finger family protein
47.697 Ahg484602 Cellulose-synthase-like C4
50.6754 Ahg483106 Plant protein of unknown function (DUF827)
58.9915 Ahg314697 pectin methylesterase 1
59.7495 Ahg481566 pleiotropic drug resistance 4
65.5057 Ahg939468 Protein kinase superfamily protein
66.9925 Ahg950641 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression