| Annotation |
|---|
| Description | jgi|Araly1|896646|Al_scaffold_0005_612 |
| Sequence |
ATGTTTTCGT ATTCTAGTAA TTGTTTTGCT TATGCTTTTC TACTTCTTCT ATCAATCGGT AACACAGTTG CATTGTCTTC GAGTACTCTG GCTCATGTTC AAGATCCAAA TCTAGTCGTT GAAGAAGTTA ACAGAAGTGT ATTCAATGCG TCAAGGAGGA GCTTGGCCTA CCTATCTTGC AGAACCGGAA ATCCTATTGA CGATTGTTGG CGGTGTGACC CGAATTGGGA AACAAACCGC CAACGTTTAG CAGATTGTGC CATTGGGTTT GGCAAAAACG CTATCGGAGG CCGTGATGGT CGAATCTATG TAGTAACAGA TCCGGCCAAC GACGATCCAG TAAACCCTAG ACCCGGAACT CTAAGATATG CAGTCACACA AGAAGAACCA TTATGGATCA TTTTCAAGCG AGATATGGTC ATTAGGCTCA AAAAAGAACT TATCATCACA TCTTTCAAGA CCATTGATGG TAGAGGCTCA AGTGTTCACA TAACCAATGG ACCATGCTTA AAGATTCACT ATGCACATAA CATCATCATT CATGGTATTA ACATCCATGA CTGCAAACCA GGATCAGGTG GCATGATTAA AGATCAGCCA CATCACACCG GGATGTATAT CCCATCCGAT GGAGACGCCG TGGCGATATT TGGAGGGAAA CACGTGTGGA TTGACCATTG CTCGTTGTCG AACTGCGATG ATGGACTCAT AGACGCTATA CATGGGTCAA CGGCTATAAC CATATCGAAC AATCACATGA CGCACCATGA CAAGGTCATG CTTTTAGGGC ATAGTGATAG TTACACGCAG GACAAGAACA TGCAAGTCAC AATTGCGTTT AACCATTTCG GAGAAGGACT CGTTCAAAGA ATGCCACGGT GCAGGCATGG ATATTTCCAT GTAGTGAACA ATGATTATAC TCACTGGGAA ATGTATGCAA TCGGTGGAAG TGCTTCTCCA ACGATATACA GCCAAGGCAA TAGATTTCTT GCTCCCAACA CCCGATTTAA TAAAGAGGTT ACGAAACATG AAGATGCACC CGAAAGCCAA TGGAGAGACT GGAATTGGAG ATCGGAAGGG GATATGTTAT TGAACGGAGC CTATTTCCGC GAGTCCGGTG CTGGATCTCC CTCTACTTAT GCAAGAGCTT CGAGCCTGAG TGCAAGACCA TCGTCTCTTG TGGGTTCCAT CACGACGACA GCAGGCACTT TGAGTTGTCG ACGAGGCCGT CGCTGTTAA |
| Length | 1239 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 3492320.. 3494853 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G27400.1 |
| Description | Pectin lyase-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.16441 |
Ahg480719 | Peroxidase superfamily protein |
| 8.7178 |
Ahg486390 | pirin |
| 9.94987 |
Ahg487769 | hydroxyproline-rich glycoprotein family protein |
| 13.6382 |
Ahg476851 | extensin 4 |
| 20.5913 |
Ahg487770 | hydroxyproline-rich glycoprotein family protein |
| 20.7846 |
Ahg479778 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 21.3307 |
Ahg322456 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 31.749 |
Ahg482955 | ABC-2 type transporter family protein |
| 38.1576 |
Ahg483261 | Protein of unknown function, DUF642 |
| 38.6782 |
Ahg488177 | ABC-2 type transporter family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|