| Annotation |
|---|
| Description | jgi|Araly1|486390|fgenesh2_kg.5__2382__AT3G59220.1 |
| Sequence |
ATGTCTATTT CTTCCGACAA CAATAGCGTA CCAAGACTTG TAATCAAGAA AGTTCTAGCA AAGCTTCAGA AGGAAGGTGA AGGCGCTGTC GTTAGAAACG GCATCACAGA GATTGACCAG AAGTTATTGG ACCCGTTCGT GTTGCTAGTT GAATTTTCCC TTTCACTCTC AGCTGGATTC CCAGATCATC CTCACAGAGG TTTTGAAAGT GTTACATACA TGCTACAAGG AGGTATCATT CACAAAGATC CCAAAGGTCA TAAAGGTACA ATCCAAGCCG GAGATGTTCA GTGGATGACA GCAGGAAGAG GAATCATTCA TTCTGAATTT CCGGAAGAAG AAGTCAACAC TGGTTTACAG CTTTGGATCA ATCTCCCTTC CACTGACAAA ATGATTGAAC CAAAATATAA AGAACTCTCA AGTTCAAACA TCCCGCGAGC AGAAGAAAAA GGAGTAGAAG TCAAAGTCCT AGCCGGAGAT TCAATGGGAA TCAAATCTCC AGTCTACACA AGAACACCAA CAATGTTCCT TGACTTTACC CTCAAGCCAG GATCTCAAAC CCACCAGACC GTTCCAGAAT CTTGGACCGC TTTTGCCTAC ATTATAGAAG GCGATGAGGG TGTGTTCGGT TCGTTGAACT CTTCCGCTAT ATCCGCGCAT CATGTTGTTG TGTTTGGACC AGGGGATTTA GTTAGCGTGT GGAACAAGTC AACTTCGAGG TCGTTGAGGT TTCTGTTGAT TGCAGGGGAA CCGATCGGTG AGCCTGTGGT TCAGTGTGGT CCGTTTGTGA TGAATTCGCA GGCGGAGATC GATATGGCTT TTGATGACTA TCAGAATGCT AAGAACGGGT TTGAAATGGC CAAGTGTTAG AGGTCACAGT GAAAAGAGTT TGTAAACAAA AACCATATAG GTTCTTTTGG GTTTTGTTTT CTTTATTTCA CATTCAAGAT GAGATCAATG TTAGGGGCTA TAATAACAAT CCTCTCTTTC A |
| Length | 991 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18202875.. 18204319 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G59220.1 |
| Description | pirin |
| TAIR curator summary | encodes a cupin-domain containing protein that is similar to pirins which interact with a CCAAT box binding transcription factor. The protein interacts with GPA1 (G protein alpha-subunit) in vitro. Mutants in the gene are affected in germination and early seedling development. |
| Alias | [ATPIRIN1][PRN][PRN1][pirin] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg487973 | Protein kinase superfamily protein |
| 4.69042 |
Ahg325669 | Protein kinase superfamily protein |
| 8.7178 |
Ahg896646 | Pectin lyase-like superfamily protein |
| 11.0905 |
Ahg491190 | squalene synthase 2 |
| 18.5742 |
Ahg491076 | Arabidopsis protein of unknown function (DUF241) |
| 19.2614 |
Ahg905237 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 22.0454 |
Ahg479021 | Late embryogenesis abundant protein (LEA) family protein |
| 23.8328 |
Ahg945603 | HVA22 homologue D |
| 28.2489 |
Ahg895965 | |
| 28.2843 |
Ahg476851 | extensin 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
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| Growth Chamber expression |
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