Detail



ID : Ahg899328

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899328|Al_scaffold_0005_3294
Sequence
ATGACCTCCA TCATCAATTC ATGGCTCCTT ATTACATCTT TCGTCCTCTT CTTATTGGCG ATTAACTGTC TAGGGGAATC TTCGACGTGT TTGGCCGTTT ACAAACAAGG CGGAGCTCCA GCCGTGTTTC AATCACCCAA ATGCCCTCGT TGGAATCTCC ACAATTGGGG TCAAAGTGGA GCTGGTCGTT GCCATACTGC AGCTATTAGA GGTCGGAGGA ACTACCAAGA GGATCGTCTC CTCTGTGCTC TTGATCTTCG CATTCCGTTT CCCGGCAAGA CTGGAACAAA GGATGTTTTG GTTGGAATTG CAGCAGTCTT TGATGGACAT AATGGTGCAG AAGCCAGTGA AATGGCTTCA AAACTTTTAT TGGATTACTT TGCTTTGCAT ATCAACTTTC TCTTGGACGC AACTTTTTCT GCTATGACGA GGAAGATGAT TGGACGACTA CCAACTAAAG GGGAGCACCG TGTTATTTTG CATGGCGTAA GTCAGGATGA AATCAGGCAT CTATACAACC TGGATTTTCA AATGCAGTTT CGAGACTCAT TGCCACTTAA TTTTGATGAT TCTCTTCACT TGGATATTAT GAAGGAAGCA TTGCTGAGAG CAATCCATGA CATTGATGCC ACATTTACTA AGGAAGCATC AACCCGAAAG CTTAATTCAG GTTCAACGGC TACAATTGCA CTTATAGCTG ATGGTCAACT AATGGTTGCT AGTATCGGTG ACTCAAAGGC ACTTCTGTGT TCTGAAAAAT TTGAGACTCT CGAAGAAGCT AGAGGTACTT TGGTGAAGTT GTACAGAGAG CGAAGGCGCA ATCGAGGCTC TTCACCATCA AGGTTCTCTG ACTTTAAACT GGAACATGGC AATGGACTAC TGCATTTCAT TGCCAAAGAA TTGACAAAGG ACCATCACCC AAATAGGGAG GATGAAAAGA TTCGTGTTGA AGCTGCAGGA GGTTATGTCA CAGAGTGGGC CGGTGTGCCA CGAGTGAATG GCCAGCTGAC TGTCTCCCGT TCAATTGGTG ACCTTACTTA TAAAAGTTAC GGTGTCATCT CTGCACCTGA GGTGATGGAC TGGCAGCCTC TACTGGCTAA TGACAGCTAC TTGGTAGTAT CATCGGATGG CATCTTTGAG AAGTTGGAGG TGCAAGAAGT ATGTGATCGT CTGTGGGAAG TAAACAATCA AACTAGCTCT GGAGCAGGAG TGCCTTCATA CTGCTCAATT TCTTTGGCAG ACTGCTTGGT TAATACTGCC TTTGAGAAGG GAAGTATGGA TAATATGGCT GCTGTTGTTG TTCCTCTAAA ATCGAATCTA GTTACGCAGC TCCAATGGAA AGAGCAGAGC ATGAATGACA ACAAAGATAA GATTGCTTCA GCACTACCCA CTAACAACTG TGCGCTTCCA TTGCCTAATG ATATAAATTT GGGTCCATTG CAATTGAAAC AGGCTCAACC ACTTGCAACC ATGTTTAACA GGTTATTGAA GTTAAAAACG GAAGTTTTTG CCGCTTTTAT ATGTCAGAGA ACCTTATTGG GGCGTCTCAA GGGCAAATGG ACAATTTGA 
Length1569
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19997628.. 20000176
Download Sequence
A.thaliana
AGI-codeAT3G63340.2
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.66025 Ahg940804 Auxin-responsive GH3 family protein
12.2474 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
14 Ahg476539 signal peptide peptidase
18.4662 Ahg495187 alpha/beta-Hydrolases superfamily protein
24.6577 Ahg915639 topoisomerase II
27.2764 Ahg918530 Glycosyl hydrolase superfamily protein
29.2916 Ahg951429 nitrogen fixation S (NIFS)-like 1
29.4618 Ahg477094 evolutionarily conserved C-terminal region 8
30.3315 Ahg950958 MEI2-like protein 1
30.5941 Ahg492161 chloroplast sulfur E
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression