Detail



ID : Ahg951429

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951429|scaffold_803316.1
Sequence
AAATCCGAGG TTTTGAATCT ATGGCGTCTA AGGTAATCTC TGCCACAATC CGCCGAACCC TAACCAATCC ACACGGCGCT TTTTCCCGGT GTCGTCACCT ATCGACCGCC GCTGCTGCGA CGGCGGTGAA TTACGAGGAT GAATCGATTT TGATGAAAGG AGTTCGAATT TCAGGTAGAC CTCTTTATTT AGATATGCAA GCGACGACTC CGATTGATCC TAGGGTATTC GATGCGATGA ATGATTCCAC GATCCATGAG TACGGTAATC CTCACTCGCG AACTCATATG TACGGCTGGG AAGCTGAGAA CGCCGTCGAG GTTGCTCGAA TCCAGGTCGC GAAACTGATC GAAGCTTCTC CGAAGGAGAT CATATTCATG TCCGGTGCGA CGGAGGCGAA CAATACGGCG GTGAAAGGAG TGATGCACTT TTACAGGGAC ACGAAGAAAC ACGTTATCAC TACACAGACT GAGCACAAGT GTGTGCTTGA TTCGTGTAGG CATTTGCAGC AAGAAGGATT TGAGGTAACT TACTTGCCTG TGAAAACTGA TGGATTGGTT GATTTAGAGA TGTTGAAAGA AGCTATTAGA CCAGATACAG GGCTAGTTTC GATTATGGCT GTGAACAATG AGATTGGTGT GGTTCAGCCT ATGGAGGAGA TTGGTAGGAT TTGCAAAGAG CATAATGTTC CGTTTCATAC TGATGCTGCT CAAGCTATTG GGAAGATACC TGTTGATGTT AAGAAGTGGA ATGTTGCTTT GATGTCAATG AGTGCTCACA AGATCTATGG ACCAAAAGGT GTTGGTGCTT TGTATGTGAG GAGGAGGCCG AGAATCAGGC TTGAGCCGTT GATGAATGGT GGAGGTCAGG AGAGGGGGTT GCGTAGTGGC ACGGGGGCTA CGCAGCAGAT TGTTGGGTTT GGGGCTGCTT GTGAATTGGC GATGAAGGAG ATGGAGTATG ATGAGAAGTG GATTAAGGGA CTGCAGGAGA GGTTGCTGAA TGGGATTAGA GAGAAGCTTG ATGGTGTTGT GGTGAATGGT TCAATGGATA GTCGATATGT AGGGAATCTG AATTTGTCGT TTGCTTATGT TGAAGGAGAG AGTCTGTTGA TGGGGTTGAA GGAAGTTGCA GTGTCTAGTG GAAGTGCTTG TACTAGTGCG AGTTTGGAGC CTTCTTATGT GTTGAGAGCT TTGGGTGTGG ATGAGGACAT GGCTCACACT TCGATTAGGT TTGGGATTGG TAGGTTTACC ACAAAGGAAG AGATCGATAA AGCGGTCGAG CTTACGGTTA AACAAGTTGA GAAGTTGAGG GAAATGAGCC CGCTTTATGA AATGGTTAAA GAAGGTATCG ATATCAAGAA CATACAATGG TCTCAACACT GATTCAACAG TTCCACTCAA ACTGTT 
Length1406
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20785880.. 20787281
Download Sequence
A.thaliana
AGI-codeAT5G65720.1
Descriptionnitrogen fixation S (NIFS)-like 1
TAIR curator summarycysteine desulfurase whose activity is dependent on AtSufE activation.
Alias[ATNFS1][ATNIFS1][NFS1][NIFS1][ARABIDOPSIS THALIANA NITROGEN FIXATION S (NIFS)-LIKE 1][NITROGEN FIXATION S HOMOLOG 1][nitrogen fixation S (NIFS)-like 1]
Gene coexpression
MR
MR Locus Description
2 Ahg472250 PAM domain (PCI/PINT associated module) protein
3.87298 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
6.08276 Ahg477251 Pre-mRNA-processing-splicing factor
6.9282 Ahg942945 SPA1-related 2
7.74597 Ahg495590 Dihydrolipoamide succinyltransferase
8.12404 Ahg470466 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
8.7178 Ahg471276 partner of Y14-MAGO
9.21954 Ahg910029 DTW domain-containing protein
9.64365 Ahg923204 DEA(D/H)-box RNA helicase family protein
10.247 Ahg484543 golgin candidate 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression