| Annotation |
|---|
| Description | jgi|Araly1|921837|scaffold_103118.1 |
| Sequence |
TAGGACGAGT TATTGAAGCA ATGGATGTTA ATGAGGTTGA AGAAAATTTC TTTGCCCCCG GTGATGCCAA GCTACACGGA GACATGTGCA ATGCCCTTTC AGTGATCTAC TGCAAGATCA TGTCTATTTT CCCGTCGCTT GAAGCTGCTC GGCCGAGAAG CAAATCTGGT ATTCAAGCTT TGTGTTCACT TCACGTGGTT TTAGAAAAAG TGAAGAACAT TCTACGCCAT TGCACTGAAT CTAGTAAACT TTATTTGGCT ATAACAGGGG ACTCAGTAGT TTTGAAATTT GAGAAGGCGA AATCATCTCT TATAGATAGC CTTAGGCGTG TTGAAGATAT AGTCCAACAG TCTATTGGAT CTCAGCTTTT GGAGATTTTG ATGGAGTTAG AGAACACCGA ATTTTCACTT GATCCATCAG AGAAGGAAAT TGGGGATCAA ATCATTGGAT TGCTGCAACA AGGGGGGAAT TTTGAGATCT CAACTGATAA TAATGAACTT GAGGTTTTCC ATCAGGCTGC TACTAGACTA GGTATCACTT CTTCTAGAGC AGCTCTCACA GAGCGAAGAT GCCTCAAGAA ACTCATTGAG AGGGCCCGAA TGGAGGATGA CAAGAGGAAA GAATCAATAG TGGCTTATTT ATTACATCTT ATGAGGAAAT ACTCAAAGCT ATTCAGAAGT GAGATTTGGG ATGACAATGA TTCACAGGGT AGTAGTTCAT TGCCTTGTTC ACCTACTATC CAGGGTTCTC TTGACGATGC CCATGGTCGT GCATTTGACC GTCAGCTGTC AAAACTGAGT TCCTTCAACT TCAGATCTTG CAATAACAAT AGGAAATCTT TACAGATGTC TGTTCCGCCA GAAGAATTGA GGTGTCCAAT ATCTTTGCAG CTTATGTATG ACCCTGTAAT TATCGCGTCT GGGCAAACTT ATGAGAGAAT CTGTATCGAG AAATGGTTTA GTGATGGACA CAACACATGT CCCAAAACTC ACCAGCAGCT TTCTCATCTA TGCTTGACTC CTAACTATTG TGTCAAGGCT CTAATTTCTA GCTGGTGTGA ACAGAACGGT GTTCAGGCCC CTGAAGGACC GCCTGAGTCT CTAGACCTTA ATTATTGGAG GTTGGCGTTG TCTGTGTCCG AGTCTACCGA CACGAGAACA GCAAAACGTG TTGGTTCTTG TAAGTTGAAG GATGTGAAGG TGGTTCCTTT GGAAGAAAGT GGAACCATTA AAGAGGAAGC CTGTGAATCA GAATACCAGG ATGATCAAGT TACTCTTGTT GAAAGATGTA CGGAATTGTT GACCACTTTA AGTGAAGTGG ATACCTTAAG GAAGAAATGC AGAGTTGTTG AGCAGATAAG ATTATTGCTA AAAGATGATG AGGAGGCCAG GATTTTCATG GGGGAAAATG GGTGTGTTGA AGCGTTGCTT CAGTTTCTAG GATCAGCTCT TACTGAAAAT AACGCTTCAG CCCAGAAAGT TGGAGCCATG GCTCTCTTTA ACTTGGCTGT GGACAGCAAC AGGAACAAGG AGTTGATGCT AGCATCAGGA ATTATTCCTC TGCTGGAGGA AATGCTCTGT AATCCACATT CCCATGGTTC AGTGACGGCA CTTTATCTGA ACCTTTCGTG TCTTGAAGAA GCAAAGCCTG TAATAGGTTC GAGTCTGGCT GTTCCTTTCA TGGTAAATCT TCTTTGGACC GAGACTGAAG TCCAGTGCAA AGTCGATGCC CTTCACTCCC TTTTTCACCT GTCCACCTAC CCTCCCAATA TCCCCTGCCT TTTATCTGCT GACATTGTCA GCGCCCTTCA GTCACTCACT ATCAGTGATG ATCAACGATG GACAGAAAAG TCCTTAGCTG TTCTACTAAA TTTGGTTTTG AACGAGGCAG GAAAAGACGA GATGGTTTCA GCACCTGGCC TTGTGAGCAA TCTCTGCACC ATTCTTGACA CGGGTGAACC AAATGAGCAA GAACAAGCTG TTTCTTTGCT TCTGATATTA TGCAATCACA GTGAGATATG TAGCCAGATG GTTTTACAAG AAGGAGTGAT ACCTTCGTTG GTATCTATTT CCGTAAACGG TACTCAACGT GGAAGAGAAA GGGCACAGAA GCTACTGACA CTATTCAGGG AACTGAGGCA AAGGGATCAA ACCCATCTAA CAGAACCACA GCATACAGTA GTCACAAGCC CCGAGGACGG ATTCTCTGTT GCTGCAGCCG CTGTAACAGA GTCAAAACCG CAATGTAAAT CAGCTTCGAG AAAGAAAATG GGAAGAGCAT TCAGTTTTCT ATGGAAAAGC AAGAGCTTCT CAGTTTACCA GTGTTGAGTC TGGTTTTTAC CTTTAGTT |
| Length | 2348 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11633406.. 11636439 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G27910.1 |
| Description | plant U-box 45 |
| TAIR curator summary | Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. |
| Alias | [ATPUB45][PUB45][ARABIDOPSIS THALIANA PLANT U-BOX 45][plant U-box 45] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg899338 | cytokinin oxidase/dehydrogenase 6 |
| 8.24621 |
Ahg472100 | Protein of unknown function (DUF793) |
| 18.9209 |
Ahg484976 | expansin-like A1 |
| 19.6723 |
Ahg486129 | VQ motif-containing protein |
| 30.7409 |
Ahg472495 | Major facilitator superfamily protein |
| 32.4962 |
Ahg474924 | regulatory protein (NPR1) |
| 35.6651 |
Ahg481012 | SUMO-activating enzyme 2 |
| 39.4968 |
Ahg476579 | Protein of unknown function (DUF793) |
| 41.4126 |
Ahg476099 | sphingoid base hydroxylase 1 |
| 44.1588 |
Ahg937924 | galacturonosyltransferase-like 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|