Detail



ID : Ahg900537

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900537|Al_scaffold_0004_1187
Sequence
ATGGCTTCTT CTTCTTTGTC TTGCATCAAG AGATACCATG TCTTTTCGAG CTTCCATGGT CCAGATGTCC GTAGAGGGTT TCTCAGTCAT TTACACAATC TCTTTGCAAG CAAAGGTATC ACGACTTTCA ATGATGAGAA GATCGATAGA GGCCAGCCGA TCGGACCTGA GCTCGTACAA GCTATTAGAG AATCTAGAGT CTCGATTGTG TTGCTCTCGA AGAAGTACGC TTCTTCAAGC TGGTGTTTAG ATGAACTGCT TGAAATCTTG AAGTGCAAAG AAGATGATGG GCAGATTTTG ATGACCATTT TTTACGACGT TGATCCTTCT CATGTTAAAA AACAGAGGGG AGAGTTCGGG AAAGCTTTCG AGAAGACTTG TCAAGGGAAA ACTGAGGAAT TGAAGCAGAG ATGGAGCAAA GCTTTGGCAC ATGTTGCAAC CATTGCTGGG GAACACTCTC TTAATTGGCC TTATGAAGCA GAGATGATCC AAAAGATTGC TACAGATGTT TTAAACAAAC TTAATCTTAC ACCGTCCAAG GATTTTGACG GGATGGTGGG ACATGAAGCT CACTTGGCAA AATTGAACTC TTTGTTATGC TTGGAAAGTG ATGAAGTCAA GATGATTGGG ATTTGGGGTC CTGCAGGGAT TGGTAAGTCC ACCATTGCTA GAGCTTTAAA CAACCAACTC TCTAGCAGTT TTCAACTTAA ATTATGGGGA ACCTCAAGGG AACATGATTC CAAGTTGTGG TTGCAAAACC ATCTTCTGTC TAAGATTTTG AACCAAGAGA ATATGAAGAT ACATCATTTA GGTGCAATCA AAGAAAGGCT ACACGACCAA AGAGTGCTTA TCATTCTTGA TGATGTAGAT GATCTAAAGA AATTAGAGGT TTTGGCTGAA GAACGTTCTT GGTTTGGTTT TGGAAGCCGG ATCATCGTTA CCACAGAAGA TAAGAAGATT TTGGAGGCAC ATGGGATCAA GGATATCTAC CATGTGGATT TTCCATCCGA GGAAGAAGCT CTTGAGATCT TATGTCTCTC TGCTTTCAAA CAAAGCTCTG TACCAGATGG CTTTGAAGAG GTTGCCAATA AAGTAGCAGA GCTTTGCGGC AATCTTCCAT TAGGCCTTTG TATCGTGGGT AAATCTTTGT GTGGGGAGAG CAAGCAAGAG TGGGAACTTC AATTATCTAG CATCGAAGCT AGTCTTGATC GAGGAATTGA AGACATTTTA AAAGTGGGTT ATGACAGATT AACGAAGAAA AATCAATCTC TATTCCTTCA CATTGCATGC TTCTTCAACT ATGAAAAGGT TGATTATGTG ACAACCATGC TAGCTGACAG TAACTTGGAT GTCAGAAATG GTTTGAAGAC CCTAGCCGAT AAATCTCTCG TGCATAAATC TACTGATGGC CATATAGTGA TGCACCATCT ACTACAACAA TTGGGTAGAC AGATAGTTCA TGAACAGTCT GACGAGCCCG GGAAACGTCA ATTTTTAACT GAGGCCGATG AGATTTGTGA TGTACTGACA ACCGAAACAG GTACTGGATC AGTCATAGGG ATATCATTTG ATACATCCAA TATCGGAGAG GTTTCTGTAG GTAAAGGGGC TTTTGAAGGA ATGCGTAATC TCCGATTCCT AACAATCTAT AGGAGTTTGC AAATACCAGA AGATTTGGAT TATTTACCTC TTCTTAGGTT ACTACATTGG AAACATTACC CAAGAAAAAG TCTGCCTTTA AGATTTCAGC CGGAACGCCT CGTGAAACTC CGTATGCGAC ACAGCAATCT CGAGAAGCTC TGGGGAGGAA TCCAGTCCCT TCCTAATCTC AAGATCATAG ATCTGAAGCT ATCAAGTGAA TTGAAAGAAA TCCCAAATCT TTCAAAATCT ACTAATCTCG AGGAATTGAC ACTTGAGTAC TGCACAAGTT TGGTGGAGCT TCCCTCTTCT ATTAAGAATC TACAAAAACT AAAGATTCTA AATGTTGATT ATTGCTCTAT GCTACAAGTT ATTCCCACCA ACATCAACTT AGCATCTCTT GAGAGAGTCG ACATGGGTGG TTGCTCACGG TTGAGAACTT TTCCAGATAT CTCCAGTAAC ATCGAGTTTC TCAATCTCGA AGATACAGAT ATAGAAGATG TCCCTCCATC AGCTGCTGGA TGTTTGTCTC GTCTTGATCA CCTCAACATT TGCAGCAGAA GCCTCAAGAG ATTGACACAT GTACCACTTT TTATAACTAA CCTTGTTCTT GATGGCAGTG ATATAGAGAC GATTCCAGAT TGCGTCATAG GTCTCACTCG TCTAGAATGG CTTTCTGTCG AAAGCTGCAC AAAACTCGAG TCAATTCCGG GTCTTCCCCG CTCCCTCCGT CTCCTAGAAG CAGACAATTG TGTATCACTC AAAAGCTTCT CTTTCCATAA CCCAACCAAG AGACTCAGTT TCAGAAACTG TTTTAAACTG GATGAAGAAG CAAGAAGAGG AATCATACAA AAATCAATTT ACGATTATGT ATGGTTACCA GGTAAAAAAA TCCCTGCAGA GTTCACTCAC AAAGCTACAG GGAGATCCAT AACCATCCCT CTGGCTCCGG GTACTCTCTC TGCTTCCTCA AGGTTTAAGG CTTGCCTTGT CATTTTCCCA GTTAATGACT ACGGATATGA AGGTATAAGC TGTAGTATAA GAAGCAAAGG AGGTGTTAAG GTTCAAAGCT GCAAGCTTCC ATATCATGAT TTGAGTTTTC GGTCAAAACA TCTGTTTATA GTTCATGGTG ACTTGTTTCG CCAACGAAGC AATTGCTATG AAGTTGATGT GACTATGAGC GAGATTACAT TTGAGTTCAA CCACAAGTAC ATCGGTGACA AGATTATAGA GTGTGGTGTA CAGATCATGA CAGAGGAAGC TGAGGATAGC AGCAGCAGGA AATTGGACAA CTATGAAACT GAGTTTGGAG AGTGGTGTTA G 
Length2961
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11657041.. 11660318
Download Sequence
A.thaliana
AGI-codeAT5G41750.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg480590 NAC domain containing protein 36
6 Ahg470988 soybean gene regulated by cold-2
7.2111 Ahg486038 salt-inducible zinc finger 1
10.583 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
14.6969 Ahg477161 WRKY DNA-binding protein 40
15.4919 Ahg472978 salt tolerance zinc finger
16.6132 Ahg486375 Eukaryotic aspartyl protease family protein
16.7033 Ahg481014 RING/U-box superfamily protein
16.9706 Ahg483040 ortholog of sugar beet HS1 PRO-1 2
20.4939 Ahg483806 phosphoinositide 4-kinase gamma 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression