Detail



ID : Ahg950444

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950444|scaffold_802331.1
Sequence
CTCAAAAACA ATCTCTAAAA AATGTCAATC ACTTACTTAC TTCCTCTGTT TCTTTCTCTC ATCATCTCCT CTGTTTCAGC TAATTTCCAA AGAGACGTTG AGATCACTTG GGGTGATGGT CGTGGACAGA TCAAGAACAA TGGAGAGCTT CTTACTTTAT CTCTAGATAA ATCCTCTGGT TCTGGATTCC AATCCAAAAA CGAATACTTG TTCGGTAAAA TCTCCATGCA AATGAAGCTT GTCCCTGGAA ACTCCGCAGG AACCGTCACA ACACTCTACT TGAAATCACC TGGAACAACA TGGGACGAGA TAGATTTCGA GTTTTTGGGT AATTCAAGTG GAGATCCTTA CACACTTCAC ACAAATGTCT ACACGCAAGG CAAAGGAGAC AAAGAACAAC AATTCAAACT CTGGTTTGAT CCAACAGCTG ATTTCCACAC TTACACCATT CTCTGGAACC CACAAAGAAT CATCTTCACC GTCGATGGAA CTCCAATTAG AGAATTCAAG AACATGGAGT CTCTAGGCAC TCTGTTTCCC AAGAACAAAC CAATGAGGAT GTACTCTAGT CTTTGGAACG CTGATGATTG GGCAACGAGA GGTGGTTTGG TCAAAACCGA TTGGTCTAAA GCTCCTTTCA CTGCTTCCTA CCGTGGCTTT AAACAAGAAG CTTGTGTTTG GTCAAACGGC AAGTCTTCTT GTCCTAATGC CTCCAAACAG GGGACCACTG GCTCGTGGTT GTCACAAGAG CTTGACTCAA CGGCTCAACA AAGGATGAGA TGGGTGCAGA GGAACTACAT GATCTATAAT TATTGTACGG ATGCAAAGAG GTTCCCTCAA GGTCTTCCTA AAGAGTGCTT AGCTGCATAG AGAGTAAAGC GTTGAGAGAT 
Length890
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17071008.. 17071982
Download Sequence
A.thaliana
AGI-codeAT5G57560.1
DescriptionXyloglucan endotransglucosylase/hydrolase family protein
TAIR curator summaryEncodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli
Alias[TCH4][XTH22][Touch 4][xyloglucan endotransglucosylase/hydrolase 22]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg940069 NDR1/HIN1-like 3
2.44949 Ahg476579 Protein of unknown function (DUF793)
2.44949 Ahg473657 Phosphate-responsive 1 family protein
3.16228 Ahg493755 EF hand calcium-binding protein family
3.74166 Ahg492070 Calcium-binding EF-hand family protein
4.3589 Ahg943550 glycerol-3-phosphate acyltransferase 3
4.47214 Ahg481111 uncoupling protein 5
4.89898 Ahg472978 salt tolerance zinc finger
5.56776 Ahg938734 seed imbibition 2
6.16441 Ahg935227 Calcium-binding EF-hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression