| Annotation |
|---|
| Description | jgi|Araly1|900749|Al_scaffold_0004_1399 |
| Sequence |
ATGGCTATCT TCTCCACAGC ACAACCACTC TCTCTGCCAC GTCATCCAAA CTTCTCCAAT CCGAATCAAC CAACTACCAA TAACGAACGT TCCCGCCACA CTATTTCTCT GATCGACCGA TGTTCGTCTC TCCGACAACT GAAGCAAACC CATGCTCACA TGATCCGTAC AGGTATGTTT TCCGATCCTT ACTCAGCTAG CAAGCTATTC GCAATCGCGG CGCTCTCTTC CTTCGCGAGC CTCGAGTATG CACGCAAGGT GTTTGATGAA ATTCCTCAAC CAAATTCTTT CACTTGGAAT ACTCTTATTC GTGCTTATGC TTCTGGACCA GACCCTGTTT GTAGCATCTG GGCTTTCTTG GATATGGTTT CGGCGGAGAG TCAGTGTTAT CCGAATAAGT ACACTTTCCC TTTCCTCATT AAAGCTGCTG CAGAAGTTTC ATCTTTGTCT TTGGGTCAAT CTCTTCATGG GATGGCGATT AAGTCAGCTG TTGGAAGTGA TGTTTTCGTT GCGAATTCTT TGATACATTG TTATTTCTCT TGCGGGGATT TAGATTCGGC TTGTAAAGTG TTTACTACAA TCAAAGAAAA AGACGTTGTT TCGTGGAATT CGATGATTAA TGGGTTTGTG CAAAAGGGTT CTCCAGATAA AGCTTTGGAG CTGTTTAAGA AGATGGAGTC AGAAGATGTT AAGGCAAGTC ATGTGACAAT GGTTGGTGTC TTATCTGCTT GTGCAAAGAT ACGGGATCTA GAGTTTGGGA GGCGGGTCTG CTCTTATATC GAAGAAAACA GGGTTAACGT GAACTTGACG TTGGCTAATG CGATGCTTGA TATGTACACA AAGTGTGGAA GCATAGAGGA CGCAAAAAGA CTGTTTGATG CAATGGAGGA GAAAGATAAC GTCACATGGA CAACAATGCT TGATGGGTAT GCTATTTCAG AAGACTACGA AGCAGCTAGA GAGGTTCTTA ACTCTATGCC TAAGAAAGAC ATTGTTGCTT GGAATGCTCT TATATCTGCT TATGAGCAGA ATGGTAAACC TAATGAGGCA CTGTTAGTGT TCCATGAGCT GCAACTTCAG AAGAACATAA AGCTGAACCA GATCACACTG GTAAGTACTT TATCAGCTTG TGCCCAGGTA GGGGCACTGG AATTAGGTAG ATGGATCCAT AGCTACATCA AAAAGAACGG CATTAAGATG AATTTTTATG TTACAAGCGC ACTGATTCAT ATGTATTCGA AATGCGGAGA TCTTGAAAAG GCGCGTGAAG TGTTTAATTC TGTAGAGAAG AGAGATGTGT TTGTGTGGAG TGCAATGATT GGTGGCCTGG CAATGCACGG ATGTGGAAAT GAAGCTGTTG ATATGTTTTA TAAAATGCAA GAGGCTAATG TAAAGCCTAA TGGTGTGACA TTCACCAATG TCTTCTGTGC TTGTAGCCAT ACCGGTTTAG TGGATGAGGC TGAGTCGTTA TTTTACAAAA TGGAATCGAG TTATGGTATT GTCCCCGAGG ATAAGCATTA TGCTTGCATA GTTGATGTTC TCGGCCGCTC GGGTTATCTG GAAAAAGCTG TGAAGTTCAT AGAGGCGATG CCAATTCCTC CAAGCACTTC TGTCTGGGGA GCGCTTCTAG GAGCTTGTAA GATCCATGCC AATCTGAGTC TTGCTGAAAT GGCGTGTACC CGTTTGCTTG AACTGGAACC TAGGAATGAT GGCGCGCATG TGCTCCTATC AAACATATAC GCTAAATCCG GGAAATGGGA CAACGTTTCT GAGCTAAGAA AGCATATGAG AGTCACTGGA CTGAAAAAAG AACCAGGATG CAGCTCAATT GAAATCGATG GCATGATTCA TGAGTTTCTC TCTGGAGATA ACGCTCACCC GATGTCTGAG AAGGTTTACG GGAAGTTACA TGAGGTTATG GAGAAATTGA AATCAAATGG TTATGAGCCA GAGATGTCAC AGGTTCTGCA GATCATTGAA GAAGAAGAAA TGAAAGAACA ATCTCTGAAT CTGCACAGCG AGAAGCTGGC GATTTGTTAT GGACTGATAT CAACGGAAGC TCCAAAGGCG ATCAGAGTTA TTAAGAATCT AAGGGTGTGT GGAGATTGTC ATTCAGTGGC TAAACTAATA TCACAGCTCT ACGATAGAGA GATAATAGTG AGGGACCGGT ATCGGTTTCA CCATTTCAGA AATGGGCAGT GTTCCTGTAA CGATTTCTGG TGA |
| Length | 2223 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13054043.. 13056262 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G29760.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a chloroplast RNA editing factor. |
| Alias | [OTP81][ORGANELLE TRANSCRIPT PROCESSING 81] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg476277 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 9 |
Ahg920552 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 11.8743 |
Ahg949231 | B-box type zinc finger protein with CCT domain |
| 17.8606 |
Ahg889026 | Cytosol aminopeptidase family protein |
| 18 |
Ahg488786 | mitochondrial editing factor 18 |
| 21.4476 |
Ahg893370 | peptide deformylase 1B |
| 22.9783 |
Ahg905049 | Alpha amylase family protein |
| 24.3721 |
Ahg495472 | ribosomal protein L11 methyltransferase-related |
| 28.4605 |
Ahg480422 | Pentatricopeptide repeat (PPR) superfamily protein |
| 37.9473 |
Ahg927712 | Pentatricopeptide repeat (PPR) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|