Detail


ID : Ahg918231

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918231|Al_scaffold_0008_2982
Sequence
ATGGAGCGAA AAAGCTTTAA TACAGAGAAG AGATCCGGAG CACTGGATCC GGGTTCAGGA TTCGGATCTT CGAAGAGGGT CAAAACACAT CACACGCAGC TGCTTCCGCC TCTGGTTGTG CCGGTGGGAC ACGCGGCATT TAGATTGCTA TGCCCTTTAT CACACGTCGG TGCGGTGATT GGAAAATCTG GAAACGTTAT CAAACAGCTC CAACAATCAA CCGGAGCTAA GATACGGGTC GAGGAGCCTC CGTTTGGGTC TCCGGATCGG GTCATCACGA TAATTGCGCA AGCAGATTCG AAATCAAGGG TGAAATTGGG TGTTAATAAC AATGGGAATG CTGAAGGAGA GAAGAAGGAG GAGGAAGTTG AGGTATCTAA AGCACAAGGA GCGTTGATTA AGGTATTCGA GCTTTTAGCG GCGGAAGCGG ATAGTGATAC GGTCGTGTGC CGATTGTTGA CTGAGTCTAG CCATGCTGGT GCTGTGATAG GCAAAGGTGG TCAAATGGTG GGGAGCATTA GGAAAGAAAC TGGCTGCAAA ATTTCTATAC GGACTGAGAA TTTGCCGATT TGCGCTGATA CTGATGACGA GATGGTGGAG ATTGAAGGAA ATGCTATTGC TGTGAAAAAA GCTCTTGTGT CTATCTCCCG CTGCTTGCAA AATTGTCAAT CGATTGACAA GGTAAGGATG GTCGGAAACA GACCTCTAGA AAAAGAGTTC CAAGCATCTT TGCATAGGCC GATAGAGACA ATCATTCAGG AGTCTCTTCC TAGGTCCATT GAAGTTAACC CTTACGATTA TAGGCTGAGG AAAGACGAGA TATTTCCCCG AGGTACTTTA GCTCGGCCTA GCGATGTGAT TCCTCATGAT ACTTTGCATC ATAGGCATAT TGAGGCGGTT CCCCAGGGTG CTTTACGCAT GCATATTGAG GCGGACCGGC AAGATGCTTT ACGCAGGCAT GTTGAGGCGG ACCGACAAGA TGCTTTACGC AGGCATATTG AGGCAGACCG GCAAGATGTT TTACGCAGGC ATATTGATGT GGTTCCTCGA GAAACGTTAT ACATGCCTTC CGATGTTGTC AGGGGAGATT GTTTTCGACA GCATAAAGAG AGGGATGATT CTCATGATTC CTTGCATAGA CCTTTCGAGA TGGTTCCACG TGATGCTATG GGCATGCCTT TTGAGTCGTT TCCACGTGAT GCTTACGGAA GGCCTATTGA AACAATCCCA CAAGAAACTC TTCGTCGGCA AAGTGCAGAT TATCTTGCAC ATCGTTATTC GACTCTAGAC ACACATAGCA TTACTACGTC TGCTTCAATA GCTAACACTG CCTCCATGAA GCCACCTCCA TCAGAAGTGG AAGTAGGGAA CCAAGATGTG GTTTTTAAGA TACTTTGTTC CACTGAGAAT GCTGGCGGAG TTATCGGGAG TGGGGGTAAA GTTGTCAGGA TGCTTCATAG CGAAACAGGT GCCTTCATAA ATGTGGGAAA TACACTTGCT GATTGTGAAG AACGTCTGAT TGCAGTAACT GCACCAGAGA ACCCTGAATG TCAAAGCTCG CCAGCCCAGA AAGCTATTAT GCTTCTTTTT TCTAGATTAT TTGAGCTTTC CACTAAAAAA ATCCTAGATA ATGGCCCAAG GACATCTATC ACTGCACGGC TTGTTGTCCC AACAAGTCAG ATTGGTTGTG TGCTGGGGAA AGGAGGTGTT ATTGTTTCAG AAATGCGGAA AACCACTGGG GCCTCAATTC AAATTTTGAA GGTTGAGCAG AACCCAAAAT GTGTTTCAGA GAATGATCAA GTTATCCAGA TTACAGGAGA GTTCCCTAAT GTGAGAGAAG CCATTTTCCA TATTACAAGC AGGCTGCGAG ACAGTGTTTT CTCCAACTCA ATGAAAAATT CCATAACCAA GAGCAGCTCC GCCTTAACTA CAGAGAGAAT CTACCACAGA CAACCAGATA ATCCTCTGTC TATTGGGTCT CATCAATCCG TTAGTAATCC ACCTACCAAC TCTTCAAGTC TGCACAGAAG ATCTGAGGAT TCCTTTTTAA GTGGGTCTCA TTCATCAGTT AACTATTCCA GACCTGTTGG CACAGATCCT TACATAAGAC CAGAAGACCC GTTTCCTGAT AGGTTTAATC CCTCTGCAGG CTATTCTCCT AATTTTGGTC GGCGGTTTAC CATGGACCAC AGTGATATCT CCCATCACTT AAGTGAGGTC CCATCTCGTT TGTGGGCGTC CCCGCCTCCA GCAGCTCCAA GAGGCTTATC TGATGCCAGT GGCGGATTAT CTTCTGCTAG GGCTGGCCAT GCGCTTGGCA GTGGACACAA ATCTGCCATC GTTACAAACA CAACCGTGGA AATTAGAGTT CCAGAAAATG CTATGAGCTT TGTGTATGGA GAGCAGGGCT ACAATCTAGA GCAACTGAGA CAGATATCGG GTGCGAGGGT CATAGTCCAT GAACCTCCTC TAGGAACAAG TGACAGGATC ATTGTCATAT CTGGAACACC TGATCAAACC CAGGCTGCTC AAAACCTCCT TCATGCCTTC ATCCTTACAG GTGAAACCTC ATTGTCCAAA AAATACAACC TAAACTAG
Length2598
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G64390.3
DescriptionRNA-binding KH domain-containing protein
TAIR curator summaryencodes a K homology (KH) domain-containing, putative RNA binding protein that interacts with HUA1, a CCCH zinc finger RNA binding protein in the nucleus. HEN4 acts redundantly with HUA1 and HUA2 in the specification of floral organ identity in the third whorl.
Alias[HEN4][HUA ENHANCER 4]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg947127 Haem oxygenase-like, multi-helical
6.40312 Ahg901754 ENTH/VHS/GAT family protein
8.3666 Ahg494671 casein kinase I-like 8
8.83176 Ahg478277 Lung seven transmembrane receptor family protein
10.9545 Ahg315410 binding
15.2971 Ahg944366 isocitrate dehydrogenase 1
17.6068 Ahg472652 gamma-adaptin 1
17.8885 Ahg935831 quiescin-sulfhydryl oxidase 2
20.3961 Ahg480465 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
26.3249 Ahg484365 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression