Detail



ID : Ahg901965

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901965|Al_scaffold_0004_2615
Sequence
ATGCAACTCT CCAAGAATCC GATCAAACAA ACGAGAAATC GAGAGAAGAA ACACACCGAC GATTTCGCGA TGAAGAGATC TGTAATCATG GCTCCGGAAT CTCCTGTTTT TTTCCCACCT CCGCTTGTTT TCTCTCCGAC GTCGGTAAAA ACGCCGTTGT CTTCTCCTCG TTCGGCGCCA CCGAAGCTGA CGATGGTTGC TTGTCCTCCA AGAAAGCCAA GGGAGACAAC AACTAAGGGT TCTGGTTCGG ATTCCGAAAC GGTGTTGAAA AGAAAACGAC CGCCGATGCT TGACTTAACG GCGGCTCCGA TGGTTGCATC GTGGTGTAGT ACGACGAGAG AGACGGCGGA GAAAGGAGCG GAGGTTGTTG AAGAAGAGGA AGATGGATAC TACTCTGTTT ATTGTAAGAG AGGAAGACGC GGACCAATGG AAGATAGGTA CTTCGCGGCG GTTGATCGTA AAGACGACGG AGCTGTTAAA AAAGCTTTCT TTGGGGTATT TGATGGTCAC GGCGGATCCA AGGCGGCGGA ATTCGCTGCG ATGAATCTAG GAAACAATAT CGAGGCGGCG ATGGCATCGG CAAGATCAGG AGAAGAAGGT TGCTCGATGG AGAGAGCGAT AAGAGAAGGT TATATCAAAA CGGATGAGGA TTTCTTGAAA GAAGGTTCGA GAGGCGGCGC GTGTTGTGTA ACCGCTCTGA TATCGAAAGG CGAGCTTGCG GTTTCAAATG CAGGAGACTG CCGGGCTGTT ATGAGTCGTG GTGGAACGGC GGAAGCTCTC ACTTCCGATC ATAATCCTTC TCAAGCAAAT GAGCTCAAAA GGATTGAAGC ATTGGGTGGT TATGTTGACT GCTGCAACGG CGTTTGGAGA ATTCAAGGGA CATTAGCAGT CTCACGAGGA ATTGGAGACC GGTATCTTAA GGAGTGGGTA ATAGCCGAAC CGGAAACCAG AACATTACGG ATTAAACCCG AGTTCGAATT CTTGATCTTA GCATCTGATG GCCTGTGGGA CAAGGTAACG AACCAAGAGG CGGTCGATGT GGTTCGGCCG TACTGCGTAG GCGTAGAGAA TCCAATGACA CTTTCTGCTT GCAAGAAACT AGCCGAGCTA TCGTTTAAGA GAGGCTCTTT GGATGATATA AGTCTAATCA TAATTCAGCT ACAACACTTT CTTCCATGA 
Length1179
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18580148.. 18581669
Download Sequence
A.thaliana
AGI-codeAT2G40180.1
Descriptionphosphatase 2C5
TAIR curator summaryEncodes PP2C5, a member of the PP2C family phosphatases. PP2C5 acts as a MAPK phosphatase that positively regulates seed germination, stomatal closure and ABA-inducible gene expression.
Alias[ATHPP2C5][PP2C5][phosphatase 2C5]
Gene coexpression
MR
MR Locus Description
11.1355 Ahg920350 Peroxidase superfamily protein
14.6969 Ahg494031 Peroxidase superfamily protein
17.2047 Ahg494337 WRKY DNA-binding protein 8
19.975 Ahg485744 C2H2-type zinc finger family protein
20.567 Ahg483255
22.2486 Ahg337336 Leucine-rich repeat protein kinase family protein
25.7682 Ahg907950
26.3059 Ahg483936 Plant invertase/pectin methylesterase inhibitor superfamily
27.3496 Ahg486595 BON association protein 1
28.1425 Ahg909901 gibberellin 2-oxidase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression