Detail



ID : Ahg905714

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905714|Al_scaffold_0003_2842
Sequence
ACAAAGTCTG AATCCAAGCA AGAGACAACA AAACCAGAAA CAACGTCTGA AACCAAGCCG GAGACGAAAC CTGAACCTCA GAAGCCTAAA CATATGAGGA GAGTGTCCAG TGCAGGGCTT AGAACTGAGT CAGTGTTGCA GAGGAAAACT GAAAACTTTA AAGAGTTCTA TTCATTGGGA AGGAAACTTG GACAAGGCCA ATTTGGGACG ACGTTTTTAT GCCTTGAGAA AGGTACGGGG AACGAGTATG CGTGTACGTC GATTTCCAAG AGGAAGCTTT TGACGGATGA GGACGTTGAA GATGTGAGAA GGGAGATTCA GATAATGCAT CACTTGGCTG GTCATCCAAA TGTTATATCT ATTAAAGGCG CTTATGAGGA TGTTGCTGCG GTACACCTTG TGATGGAGTT GTGTTCGGGT GGCGAGCTTT TTGATAGAAT TATTCAACGT GGACATTACA CTGAGAGGAA AGCTGCTGAG CTTGCGAGAA CCATTGTTGG GGTTTTAGAG GCTTGTCACT CTCTTGGTGT TATGCATCGA GACCTCAAGC CCGAGAATTT TCTATTCGTT AGTAAAGAGG AAGATTCCCT CTTGAAAACG ATCGACTTTG GACTCTCAAT GTTCTTTAAG CCAGATGAGG TTTTTACAGA TGTTGTTGGT AGTCCGTATT ATGTAGCTCC AGAAGTTCTT AGAAAGCGTT ATGGTCCTGA ATCAGATGTG TGGAGTGCTG GTGTGATTGT TTACATTTTG TTAAGCGGAG TTCCTCCTTT TTGGGCCGAA ACCGAACAAG GTATTTTCGA GCAGGTCCTT CATGGAGATC TTGACTTTTC ATCTGATCCA TGGCCAAGCA TCTCTGAAAG TGCAAAAGAC TTGGTGAGGA AAATGCTTGT TCGGGACCCC ACGCGAAGAC TAACCGCACA TCAAGTATTA TGTCATCCAT GGGTACAGAT TGACGGTGTG GCTCCAGATA AACCTCTGGA CTCTGCTGTT CTGAGCCGTA TGAAGCAATT TTCTGCAATG AACAAGTTCA AGAAAATGGC TCTTAGATTT TTTCAACTTG TCTTATCCGA AGAAGAAATA GCCGGTTTAA AAGAAATGTT CAAGATGATT GACACAGACA ACAGTGGTCA GATAACTTTT GAAGAACTGA AAGCAGGACT AAAACGAGTT GGTGCCAATC TCAAAGAGTC AGAAATTCTT GATCTAATGC AAGCTTTAGA TCTAAGGAAC AGGAAGTATA AGAATTCACT AACATAA 
Length1257
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12102898.. 12104760
Download Sequence
A.thaliana
AGI-codeAT3G10660.1
Descriptioncalmodulin-domain protein kinase cdpk isoform 2
TAIR curator summarypredicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.
Alias[ATCPK2][CPK2][calmodulin-domain protein kinase cdpk isoform 2]
Gene coexpression
MR
MR Locus Description
5.19615 Virus0772
7.61577 Ahg357655
9.38083 Virus3871
20.7364 Ahg929715
22.6053 Ahg891588
23.4307 Ahg315391 Protein of unknown function (DUF784)
32.1248 Ahg328460 SCR-like 24
33.6303 Virus2020
36 Ahg924629 non-intrinsic ABC protein 10
38.1576 Ahg337814
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression