| Annotation |
|---|
| Description | jgi|Araly1|905901|Al_scaffold_0003_3029 |
| Sequence |
ATGTCTGGGA TTGCTGAGGT GTTGGTAGCA GTTGGCGATG ATATTTTTGT TGTGGAGGAG GACATGGTTC AAACTATTAG GTTTGATGAG CCTAGTGTTG ATGACTCTGA GATGCAGAAT GATGATTCTG GGAATTTGAT TGGAGTGATG GAAACAAAAC AAATTGCTAT TAACTACTCT TGTGAGTCAG CCCTTCCTCC GCAGCAAATG GCTTGGTGTG GAATGGATAG CGTTCTTCTC TATTGGGATG AGGATTTAAT GATGGTGGGA GACCCAGTTC ACTATTTCTA TGATGAACCT GTAATTCTTA TCCCAGAATG CGATGGAGTG AGAATATTAT CTAACACGAA TCTTGAATTT CTGCAAAGAG TACCTGATTC TACTGAGTCA ATCTTTAAGA TTGGAAGCAC ATCACCTGCA GCTTTGCTAT ATGATGCTTT GGATCATTTT GACCGGCGAA GTGCTAAGGC AGATGAAAAT TTGAGATTAA TTCGTTCATC ATTGTCTGAG GCTGTTGAAT CCTGTATTGA TGCCGCTGGA CATGAATTTG ATGTAACTCG TCAGAGGGCT CTGGTACGAG CAGCAAGCTA TGGACAAGCT TTCTGCAGCA ATTTTCAGCG TGATCGTGTC CAAGAGACTT GTAGAACGTT ACGGGTTTTA AATGCGGTAT GTGATTCTGC TATTGGCATA CCTCTTAGCA TTCAGCAGTA CAAGTTACTG ACACCAGTGG TTTTGATTAG TCGCCTTATT AATGCTCATT GCCACTTTCT TGCTCTGCGG ATATCTGAGT ACTTAGATAT GAATAAAGAA GTGGTGATAA TGCATTGGGC ATGTGCAAAG ATAACTGCTT CACCATCAAC TCCAGATTCT CATCTTCTTG AAATTTTACT TGATAAGCTC CAACTATGCA AAGGAATATC GTATGCTGCA GTGGCCACTC ATGCTGATAA CTGTGGGCGT CGAAAGTTAG CTGCAATGCT AGTTGAACAT GAACCACGCT CCACAAAACA GGTACCTCTT CTATTAAGCA TTGGGGAGGA AGACACTGCT TTAGTGAAAG CAACTGAGAG CGGTGACACC GACCTGGTTT ATCTGGTCAT ATTTCATATC TGGCAAAAGA GGCCTCCTTT GGAATTCTTT GCGATGATCC AAGGAAGAGT TTTGGCACGT GATCTATTTG TAGCTTATGC ACGGTGTCAT AAACATGAAT TTCTGAAGGA TTTCTTCTTA TCTACGGGCC TGATTCATGT GGTAGCTTTT CTATTATGGA AAGAATCATG GGATATGGGG AAAAACCCAA CGGCAAGCAA AGGATCTCCG TTGCATGGTC CGCGCATAAA ACTAATAGAG AAGGCTAGAA ACCTTTTCTC CCAGACAAAG GAACACACTT TCGAGTCTAA GGCTGCTGAG GAACATGCAA AACTCCTGAA GATACAACAT GAGCTAGAAG CTTGTACGAA GCAGGCTATC TTTGTTGATT CAAGCATCAA TGATACTATA CGCACATGTA TTGTCCTGGG TAATAACCGT GCTGCAATAA AAGTGAAGAC AGAATTCAAG GTCAGTGATA AAAGATGGTA TTGGCTTAAA GCATTTGCTC TCGCTAGAAT CAAAGACTGG GCAGCGCTTG AAAAGTTTTC AAAGGAAAAG AGACCACCAA TGGGGTTTCG TCCATTTGTG GAGGCATGCA TTGATGCAGA TGAGAAAGCG GAAGCTCTAA AATACATCCC CAAACTGTCA GATCTTGTGG AAAGAGGCGA GGCTTATGCT CGTATTGGAA TGGCAAAGGA AGCGGCTGAT TGCGCAGCTC AGGCAAATGA TGGAGGAGAA TTGCTTGAGA GATTCAGGAA GACGTTTGTA CAGAATGCTA TTTTCGATAC CTTGAAAATG CCTTTCCAAG GAGCCTCTTA G |
| Length | 1911 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 13408187.. 13419096 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G38020.1 |
| Description | vacuoleless1 (VCL1) |
| TAIR curator summary | necessary for proper vacuole formation and morphogenesis in Arabidopsis |
| Alias | [EMB258][MAN][VCL1][MANGLED][VACUOLELESS 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.2379 |
Ahg491902 | phosphate starvation response 1 |
| 28.3373 |
Ahg494661 | type one serine/threonine protein phosphatase 6 |
| 29.1548 |
Ahg333465 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| 32.9848 |
Ahg894515 | indole-3-acetic acid inducible 28 |
| 34.4964 |
Ahg490319 | DNA mismatch repair protein, putative |
| 38.4708 |
Ahg906549 | glutamate receptor 2 |
| 40.7676 |
Ahg490418 | GRAM domain family protein |
| 44.3509 |
Ahg942697 | MUTL-homologue 1 |
| 46.465 |
Ahg474667 | FAD/NAD(P)-binding oxidoreductase family protein |
| 59.3296 |
Ahg493953 | HD domain-containing metal-dependent phosphohydrolase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|