Detail



ID : Ahg906183

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906183|Al_scaffold_0003_3311
Sequence
ATGAAAGTCA CTAGCTATTC TCGCATTCTA ATAATCTTGG CCGCCCTTGT AGGTGCTCTT GTTGTTCCCT CGAAGGCTCA AGACAGCCAG CAAGACTATG TAAATGCTCA CAACCAGGCA CGGTCGCAGG TAGGCGTAGG CCCCATACAG TGGGACGAGG GGGTTGCAGC CTACGCTCGG AGCTACGCAG AGAACCTAAA AGGCGACTGC AGACTCGTAC ATTCCGGTGG GCCTTACGGG GAGAACTTGG CCGGTAGTAG CGGTGACTTT TCTGGCGTCG CTGCTGTGAA CTTGTGGGTT AACGAGAAGG CTAACTACAA CTACAATTCA AACACGTGCA ACGGAGTTTG CGGTCACTAC ACTCAAGTTG TTTGGAGAAA TTCAGTGAGA CTCGGATGTG CCAAAGTGAG GTGTAACAAT GGTGGAACCA TCATTAGTTG CAATTATAAT CCTCCGGGGA ACTATGCGAA CCAGAAGCCT TACTAA 
Length486
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18031426.. 18031911
Download Sequence
A.thaliana
AGI-codeAT2G14580.1
Descriptionbasic pathogenesis-related protein 1
TAIR curator summarypathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.
Alias[ATPRB1][PRB1][basic pathogenesis-related protein 1]
Gene coexpression
MR
MR Locus Description
2 Ahg473540 Protein of unknown function (DUF567)
2.44949 Ahg943027 osmotin 34
4 Ahg900074 Protein of Unknown Function (DUF239)
5.19615 Ahg495626
8.7178 Ahg930199 pathogen and circadian controlled 1
10.9545 Ahg486168 beta-1,3-glucanase 2
11.4891 Ahg887884 glutamate receptor 2.7
12.6491 Ahg889845 cysteine-rich RLK (RECEPTOR-like protein kinase) 16
16.2481 Ahg945809
17.0294 Ahg340627
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression