| Annotation |
|---|
| Description | jgi|Araly1|906811|Al_scaffold_0003_3939 |
| Sequence |
ATGGAGTCGC TGCTCTCTAG TTCTTCTCTT GTTTCCGCTG CTGGTGGGTT TTGTTGGAGG AAGCAGAATC TAAAGCTCCA ATCTTTATCA GAAATCCGAG TTCTGCGTTG TGATTCGAGT AAAGTTGTCG CAAAACCGAA GTTTAGGAAC AATCTTGTTA GGCTTGATGG TCAAGAATCT TCATTGTTGT TGTATCCGAA ATATAAGTCG AGATTTCGGG TTAATGCCAC TGCGGGTCAG CCCGAGGCTT TCGATCCGAA TAGCAAACAT AAGTCTTTTA GAGACTCGTT AGATGCGTTT TACAGGTTTT CTAGGCCTCA TACAGTTATC GGCACAGTGC TTAGCATTTT ATCTGTATCT TTCTTAGCAG TAGAGAAGGT TTCTGATATA TCTCCATTAC TTTTTACTGG CATCTTGGAG GCTGTTGTTG CAGCTCTCAT GATGAACATA TACATAGTTG GGCTAAATCA GCTGTCTGAT GTTGAAATAG ATAAGGTCAA CAAGCCATAT CTTCCATTGG CATCAGGGGA ATATTCTGTT AACACCGGCA TTGCAATAGT AGCTTCCTTC TCCATCATGA GTTTCTGGCT CGGGTGGATT GTTGGTTCAT GGCCATTGTT CTGGGCTCTT TTCGTGAGTT TCATGCTCGG TACTGCATAC TCTATCAATT TGCCACTTTT ACGGTGGAAA AGATTTGCAT TGGTTGCAGC AATTTGTATC CTCGCTGTCC GAGCTATTAT TGTTCAAATC GCCTTTTATC TCCATATTCA GACCCATGTG TTTGGAAGAC CAATCTTGTT CACGAGGCCT CTTATTTTCG CCACTGCGTT TATGAGCTTT TTCTCTGTCG TTATCGCATT GTTTAAGGAT ATACCTGATA TTGAAGGGGA TAAGATATTC GGGATCCGGT CATTCTCTGT AACTCTGGGT CAGAAACGGG TGTTTTGGAC ATGTATTTCA CTACTTCAAA TGGCTTACGC TGTTGCGATT CTTGTTGGAG CCACATCTCC ATTCATATGG AGCAAAGTCA TCTCGGTTGT GGGTCATGTT ATACTCGCAA CAACTTTGTG GACTCGAGCT AAGTCCGTTG ATCTGAGTAG CAAAACCGAA ATAACTTCAT GTTATATGTT CATTTGGAAG CTCTTTTATG CAGAGTACTT GCTGTTACCT TTTTTGAAGT GA |
| Length | 1182 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 22245116.. 22247598 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G18950.1 |
| Description | homogentisate phytyltransferase 1 |
| TAIR curator summary | Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading. |
| Alias | [ATHPT][HPT1][TPT1][VTE2][HOMOGENTISATE PHYTYLTRANSFERASE][homogentisate phytyltransferase 1][VITAMIN E 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8 |
Ahg923649 | Cation efflux family protein |
| 9.74679 |
Ahg494409 | RAB GTPase homolog A1C |
| 14.3875 |
Ahg949044 | Nucleotide-sugar transporter family protein |
| 17.088 |
Ahg921160 | PDI-like 1-1 |
| 18.8944 |
Ahg942000 | pseudo-response regulator 5 |
| 19.0788 |
Ahg481034 | cold, circadian rhythm, and rna binding 2 |
| 25.7099 |
Ahg477810 | Signal peptidase subunit |
| 26.1725 |
Ahg944923 | Low temperature and salt responsive protein family |
| 28.4605 |
Ahg941057 | DNA/RNA polymerases superfamily protein |
| 28.5657 |
Ahg924869 | translocase of the inner mitochondrial membrane 13 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|