Detail



ID : Ahg907883

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907883|Al_scaffold_0002_964
Sequence
ATGGTGTATA TTCTTTTGTT AATAGCTTGG AGGATTAAAA ACATGACTAT TGCTTTCCAA TTGGCTGTTT TTGCATTAAT TATTACTTCA TCAATCTTAC TGATTAGTGT ACCCGTTGTA TTTGCGTCTC CTGATGGTTG GTCGAGTAAC AAAAATGTTG TTTTTTCTGG TACATCTTTA TGGATTGGAT TAGTCTTCTT GGTGGGTATC CTTAATTCTC TTATCTCTTG A 
Length231
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8226135.. 8226365
Download Sequence
A.thaliana
AGI-codeATCG00300.1
DescriptionYCF9
TAIR curator summaryencodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II.
Alias[YCF9]
Gene coexpression
MR
MR Locus Description
13.9642 Ahg947294
23.7487 Ahg925544 acetyl-CoA carboxylase carboxyl transferase subunit beta
25.4951 Ahg907865 photosystem II reaction center protein B
26.1534 Ahg925489 ATP synthase subunit C family protein
32.4037 Ahg315554 CemA-like proton extrusion protein-related
33.541 Ahg907863 photosynthetic electron transfer B
36 Ahg475560 photosynthetic electron transfer A
36.4829 Ahg925440 Chloroplast Ycf2;ATPase, AAA type, core
36.8239 Ahg925953 photosystem II reaction center protein C
39.064 Ahg925483 photosystem II reaction center protein M
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression