| Annotation |
|---|
| Description | jgi|Araly1|907940|Al_scaffold_0002_1021 |
| Sequence |
ATGGCAGCTA GAGTCAAAGA AGAGGAAAGT TTGGTGGTTG TGAACGGAGA AGAGGAAGAG CATGATTCGA GGGAGAGATT TCTACTTAGA TACTTTTTGC AAGAATGGAA GCTTGTTAAA TCCCTTCTCG ATGATATTGT TGCAAATGGC CGTGTCATTG ATCCTTCTTC TGTTCAGAAA ATCCGCTCCA TCATGGATAA ATACCAGGAG CAAGGTCAAC TAGTGGAACC TTACTTAGAG AGTATAGTTT CTCCATTAAT GTTTATCATC CGTTCGAAAA CAGTTGAATT AGACGTCAAA CCTGATGAAA TTCTCGATAT TGTTAAGCCG ATAAGCATTA TTATCTATGC TTTAGTTACT GTATGTGGTT ACAAAGCTGT TATCAAGTTC TTTCCGCATC AAGTATCTGA TTTGGAACTC GCTGTGGCAC TTCTGGAGAA GTGCCATAGT ATGACTTCTG TTTCGTCGTT GAGGCAAGAA AGCACTGGAG AAATGGAGGC TAAATGTGTT ACTCTTTTGT GGCTTTCAAT CCTTGTGTTG GTCCCGTTTG ATATTTCTTC TGTTGATACA AGCATTGCAA ACGATAAGAG CTTTGGTGTG GACGATCTGG CTCCTTTGGT ATTGAAGATT TTGGGTTTCT GTAAGGACTA TCTGTGCAGT GCTGGCCCTA TGCGCAGGAT TTCGGGATTG CTTCTCTCTA AGCTTTTAAC GCGTCCGGAT ATGGGAAAGG CATTTGCAAG TTTTTTCGAG TGGACACATG AAGTTTTATC TTCTAAGGAA GATAGTGTTG TGAACAACTT TCGCTTGATT GGTGTGATGG AGGCTCTGGC TGCCATTTTT AAGATTGCTA GCCGGAAAGT GTTGCTAGAT GCCCTTCCTG TTGTTTTGAA TGATGTGATC GTGCTAAGCA AATCAAATGG AGCAACTAGA AGTCCTCTGC TTCGCAAGTA TTTGATCCAG TTAACTCAGA GGATAGGGCT TGTTTGTCTT CCTCATCGCT CACCTTCCTG GCGCTATGTG GCTCAAACCG CCTCCCTTTC TGAGAATATA TCTATGAGTT CGACCCACTT GTTGGCACCG CCAGATCATG CTATCTTTGC CGTCTCGCAA CCAGAGAGTT CGGATGACCA AGAGGATGAA GATATGGATG TTCCTGAAAT CTTAGAACAG ATAATTGAAA TGCTACTCTC TGGTTTGAGA GACACGGACA CAGTAGTTCG TTGGTCTGCT GCAAAGGGTA TAGGTCGTGT AACTTCACGA CTAACATCCG TTCTTTCTGA AGAAGTGCTG TCATCTGTAT TGGAACTGTT TTCACCAGGA GAGGTACTCA AAATTAATGG ATATCTGGCA TGTTCTAAAA TCCAATCAAA ACAGGCTGAC AGTTATTATA TTCAGGGAGA TGGCTCATGG CATGGGGGTT GCTTGGCTTT AGCTGAACTG TCTCGCAGAG GGTTACTGTT GCCTAGAAGT TTCCCACAAG TCGTCCCAGT TATTGTTAAG GCACTCCATT ATGATGTCCG TCGAGGTCCG CACAGTGTTG GATCTCATGT GCGTGATGCA GCTGCCTACG TTTGTTGGGC ATTTGGGCGC GCCTATTACC ACAAAGATAT GAAAAATGTC CTGGATCAGC TTGCTCCAGA TTTATTGATA GTGGGTTCCT TTGATAGAGA GGTGAACTGT AGAAGGGCTG CTGCCGCTGC TTTCCAAGAG AATGTTGGAA GGCAAGGAAA TTACCCTCAT GGGATTGACA TAGTGAACAT AGCTAACTAT TTTTCCCTTT CTTCTCGGGT GAACTCGTAC CTTCAGGTTG CTGCTTCCAT TGCTCAATAT GAAGGGTATC TATATCCTTT TGTGGATGAA TTGCTATACA ACAAGATCTG CCACTGGGAT AAAAGCTTGA GAGAACTTGC CGCAGAAACT CTTGCTGCTC TTGTTAAATA CGAGCCTAAG CACTTTGCCA ACTATGTGCT GGAGAAACTA ACTCCTCGTA CCCTTTCAAG TGATTTGTGC ATGCGCCATG GTGCAACATT GGCAGCTGGA GAGGTTGTGT TAGCTCTGCA CCAGTGTGGC TATGTACTTT CTGCTGATAG CCATAAGCGT ATGGCTGGGA TTGTCCCTGC CATTGAGAAA GCACGGCTTT ATCGTGGAAA AGGTGGAGAA ATAATGCGAC TGGCTGTCTC ACGGTTTATC GAGTGTATCT CGTTATCGCA TGTGACATTA ACTGAGAGAA CTGAACGGAT CCTGCTTGAT ACCCTCAATG AGAATTTGAG ACATCCCAAT TCTCAAATAC AGAATGCAGC TGTCAATGCT GTTAAACAGT TTGTGCAATC CTATCTCGTT TGCAATGATA AGATTGCTGT TGATTTAGTA TCAAAACACT TGACACATCT AACCGACCCA AACGTAGCTG CTCGGAGAGG TTTTGCACTT GCACTAGGTG CCTTGCCATG TGAACTATTG ACTGCAAAGT GGAAGGATGT AGTTTTGAAG CTCTGCAGTG CATGTCAGAT AGAGGCTAAT CCTGAAGATA GAGATGCTGA GGCACGCATG AATGCTGTGA ATGGACTCAT ATCCGTGTGT GAAACTCTTA CTCAGCGAAG TGCTAGTGAT CCTGAAAACG ATGACCTGTC TCTTTTTGTT CTTATCAAGA CTGAAGTGGT GGATACTTTA CTGAAAGCTC TTGATGACTA TTCAGTTGAT AACAGAGGTG ATGTTGGTTC TTGGGTTCGT GAAGCTGCAA TCCATGGACT TGAGAAGTGT ACATATATTC TCTGTAAGAA AGTCCGAACA AATGCAGCGG ATGATCATAA CAATGAATCA TCCTCGCTTT TTGATTCAAA TCTCGCAAAC CATTTGATTG GAGGTATTGT GAAACAAGGA ATGGAGAAAA TGGATAAATT AAGAGAAACT GCTGCAAAAG TTCTTCAAAG GATTTTGTAT CACGAAACTG TTACCGTCCC TTTCATACCT CATAGAGAAA CACTGGAAGA AGTTATTCCC AACAAAGCAA GCTTACAATG GGCGGTTCCG GAATTCTCTT TCCCACGTTT TGTTCAGCTC TTGAAATTCC GTTGTTATAG CAAACAGGTA ATGTCTGGAT TAGTAGTTTC TATCGGAGGA TTACAAGAGT CGCTTAAAAC AGCTTCGCTC TCTGCATTAC TGGAGTATTT GAGGGAAGAA GATGAAGCTA AAGACCTCAA ACAACAACAA TCTAGAGAAT CTGCGATTTG CGACGACATC CTCTGGATAC TTCAAGAGTA CAAAAAATGT GACCGAGTTA TCGTACCCTG TCTAAAGACA ATTCAAGAGC TCTTGGACAG GATTTTTCGG AATCAAGAGG CTTATACGTT GAGTTTCTAC ACGGGAGTCA TGGATTCCTT AGCCATCGAA CTAAGAGCCT CAAAGAAATT CGAAAAGGTA GACGCGGGCG TTGGAATACT TGGGTCTATT GCCTCTGTTT CGGAACCCAT CAGCACAGAA GCGTTCTCTC AGCTTCTATC ATTCCTTGCC CACCAATACC CAAAGGCTCA TATCCGAAAT AAGGCAGCTT TTCAAGCCTA TCTTGCGCTG CTACAAAACA AAATCTTAGT ACCAGAGGAC AAGATTGAGA AAGTGAAACA TATAATATCT GTGACTTGTT GGGATGCTGA CATGGAGTCA ACCCAATCTC AGAGGTTAGA ATTGTGTGAA TTGACTGGTT TAGATCATGG AGTAGTGTTC AAGACCAGAA TCAGAAGGGT GACTAGGGAT AGAATTACGG CTTTGGACGA GAATGCGTCT TACTCAGCTC TGGTCGATTC CTCTGGCTTC TGA |
| Length | 3813 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8820770.. 8826612 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G60740.1 |
| Description | ARM repeat superfamily protein |
| TAIR curator summary | Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization. |
| Alias | [CHO][EMB133][TFC D][TTN1][CHAMPIGNON][EMBRYO DEFECTIVE 133][TUBULIN FOLDING COFACTOR D][TITAN 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg471529 | ATPase E1 |
| 8.7178 |
Ahg341309 | Sterile alpha motif (SAM) domain-containing protein |
| 10.198 |
Ahg350885 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 12.2474 |
Ahg319110 | Homeodomain-like superfamily protein |
| 14.7986 |
Ahg497488 | eukaryotic translation initiation factor 2 |
| 20.0998 |
Ahg477786 | ARM repeat superfamily protein |
| 20.4939 |
Ahg489227 | long chain base2 |
| 21.4476 |
Ahg470845 | Surfeit locus protein 5 subunit 22 of Mediator complex |
| 21.4476 |
Ahg332253 | |
| 22.8035 |
Ahg484399 | Ribosomal protein S21 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|