Detail



ID : Ahg908250

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908250|Al_scaffold_0002_1331
Sequence
ATGGGAGCAG ACGCAATCCA AACGAACGGT CACGATCAAA CCAAGTTAAC CGGCGGTGAA GAGATCCAAC GGCTGAGATG TTTCGTGAAG AACTACGAAT GGGGCAAACT CGGACCGGAC TCATTGGTGG CGAGACTCCA AGAGGCTAAT ACAGGACAAC GAGTCGACCC GGAGATTCCT CACGCCGAGT TTTGGATGGG GACTCATGAG TCAGGACCGA GTCATGTTGA ATTTGGGTCG TTGGGTCATG GTGGGTCTGA TAAGTGTATG GTTACATTGA AATCGTGGGT TTTGGATAAT CCGGATTTAC TCGGGTCTAA AGTCGTGGAC AAGTGGGGTT GTGATCTTCC TTTTCTCTTC AAGGTGTTGT CAGTGACAAA AGCATTGTCG ATTCAAGCAC ATCCAAATAA GGCTTTAGCA GAGAAATTGC ATAGAGAAGA TCCTCTTCTC TATAGAGATA ATAACCACAA GCCTGAGATT GCTCTTGCTG TTACTCCTTT TGAAGCCCTT TGTGGTTTCG TACCTCTCAA GGAACTGAAG GAGGTTATCA CCAATGTACC AGAGATCACA GAGCTTGTGG GAAGCAAAGC TGCAGATCAA ATCTTCAACG TCCACGAACA CGATGAAGAT GAGAGAGTCA AATCCGTTGT CCGGTTGATC TTCACGCAGT TGATGTCCGC AAGCAACAAT GAGACGAAGC AAGGGGTATC TCGGATGAAG AATCGTCTGC TCTTAGAGAC CAAACACCGT GAACTGTCGG AGAAAGAGAA GTTGGTTTTG GAACTGGAGA AACAGTACTC AGGTGACATA GGTGTGATCT CAGCCTTCTT CTTTAACTAC GTCAAGCTTA ATCCTGGAGA GGCTTTGTAT TTGGACGCAA ACGAGCCACA TGCTTACATC TCCGGCGACT GTATCGAGTG TATGGCGGCT TCAGACAACG TTGTTAGAGC TGGCCTTACT CCTAAACACC GCGATGTTCA AACCCTTTGC TCTATGCTTA CCTACAAATT GGGCTACCCG GAGATTCTGA AAGGATTTCC TCTAACTCCT TACGTTACAA GGTATCTTCC TCCATTTGAT GAGTTCGAAG TGGACCATTG CGATCTACCT GGTGGAAATT CGACGGTTTT TCCGGCAGTA CCGGGGCCTT CGGTTTATCT GGTTATTGAA GGTCAAGGGA AATTGCAAAC CGGTTCATCT CAATTGTTGG TGAACCGAGG AGATGTTTTG TTTGTTCCGG CTCATAACGA GGTTCACGTA ACCGGAGAAA GTGATATGAT GAAGCTTTAC AGAGCTGGAG TCAGCAGCAG ATTCTTCCAA ACACTCTAG 
Length1329
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11392713.. 11395055
Download Sequence
A.thaliana
AGI-codeAT1G67070.1
DescriptionMannose-6-phosphate isomerase, type I
TAIR curator summaryEncodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
Alias[DIN9][PMI2][DARK INDUCIBLE 9][PHOSPHOMANNOSE ISOMERASE 2]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg311315 cytochrome P450, family 78, subfamily A, polypeptide 8
5.91608 Ahg927355 organic cation/carnitine transporter 2
7.54983 Ahg481535 Ran BP2/NZF zinc finger-like superfamily protein
7.68115 Ahg485654 purple acid phosphatase 22
8.12404 Ahg481690 C2H2-type zinc finger family protein
8.48528 Ahg482364 Transcription elongation factor Spt5
8.66025 Ahg942017 Protein of unknown function, DUF599
10 Ahg920694 Pyridoxal phosphate phosphatase-related protein
10.247 Ahg488458 carboxyesterase 17
10.583 Ahg327309 H(+)-ATPase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression