Detail



ID : Ahg910330

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|910330|Al_scaffold_0001_584
Sequence
ATGGCTGCTT CATCAGCTTG TCTTATTGGG AGCGGATTGT CTGTCTACAC AACCAAACAG AGGTCTCAAA AGCTTGGGCT TGATAGGGCA TCTAAAGCTA CAGTTGTGAA GGCTTCTTTG GATGAGAAGA AGCATGAAGG AAGAAGAGGT TTCTTCAAAC TCTTACTAGG AAACGCTGCA GCTGGAGTGG GTTTGCTTGC AAGTGGAAAC GCAAATGCAG ACGAACAAGG ACAAGGGGTT TCTTCTTCTA GGATGTCTTA TTCTAGGTTT CTAGAGTATT TGGATAAGGG AAGGGTTGAG AAAGTAGATT TGTATGAGAA TGGGACTATA GCTATTGTTG AGGCTGTTTC TCCTGAGTTG GGTAACCGGA TTCAGCGTGT ACGTGTGCAG CTACCTGGAT TGAGTCAGGA GCTTCTCCAG AAGTTGAGGG CAAAGAATAT TGATTTTGCA GCACATAATG CTCAGGAAGA CCAAGGTTCT CCGATACTTA ACTTGATTGG GAATCTTGCA TTCCCGGTTA TTTTGATTGG CGGTTTGTTC CTTCTATCGA GAAGGTCCTC TGGTGGAATG GGTGGCCCTG GTGGTCCTGG CTTCCCACTC CAAATTGGTC AGTCGAAAGC AAAGTTTCAG ATGGAACCAA ACACTGGTGT AACTTTTGAT GATGTTGCTG GAGTCGACGA AGCCAAGCAG GATTTCATGG AAGTGGTGGA GTTTCTGAAG AAGCCTGAGA GGTTCACTGC AGTTGGTGCC CGGATCCCCA AAGGTGTTCT CCTTGTTGGT CCTCCTGGTA CTGGGAAAAC CCTGCTGGCA AAAGCCATTG CTGGTGAAGC CGGTGTGCCC TTCTTTTCCA TCTCGGGTTC TGAGTTTGTT GAGATGTTTG TCGGTGTTGG TGCCTCAAGA GTCCGCGATC TTTTCAAAAA AGCCAAAGAA AATGCTCCAT GCATTGTTTT CGTGGATGAA ATAGATGCTG TTGGTAGGCA AAGAGGAACT GGAATTGGTG GAGGTAATGA TGAAAGAGAA CAGACCCTTA ATCAGCTCCT GACTGAGATG GATGGTTTTG AGGGTAACAC TGGTGTTATC GTAGTGGCTG CAACCAACAG AGCAGACATT CTTGACTCCG CTTTGCTAAG GCCAGGACGG TTTGACCGGC AGGTATCTGT TGACGTTCCA GACGTTAAGG GAAGAACAGA TATACTCAAG GTTCACTCCG GGAATAAGAA ATTTGAAAGT GGTGTTTCAC TTGAAGTAAT AGCCATGAGA ACGCCTGGAT TTAGCGGAGC TGATCTTGCA AACCTCTTGA ACGAGGCTGC CATATTGGCC GGCCGTCGTG GAAAGACTGC TATATCATCA AAAGAGATCG ATGACTCAAT TGATAGAATT GTAGCTGGCA TGGAAGGAAC AGTCATGACA GATGGGAAGA GCAAAAGCTT GGTTGCTTAC CATGAAGTTG GCCATGCCGT ATGTGGAACA TTGACTCCAG GACATGATGC TGTCCAAAAG GTCACATTGA TACCACGAGG CCAGGCAAGA GGTCTGACTT GGTTCATTCC CTCAGATGAC CCAACTCTAA TCTCCAAACA GCAGCTCTTT GCAAGAATTG TTGGTGGACT CGGTGGTAGA GCCGCTGAAG AAGTCATCTT TGGTGAGCCC GAGGTGACTA CTGGTGCAGT TAGTGACTTA CAACAGATCA CCGGTTTGGC TAAGCAGATG GTGACAACAT TTGGGATGTC TGAAATTGGA CCATGGTCGC TAATGGATTC ATCGGCTCAA AGCGATGTCA TTATGAGGAT GATGGCAAGA AACTCAATGT CTGAGAAGCT TGCAAATGAT ATCGATACAG CGGTGAAGAC ATTATCAGAC AAAGCATACG AGATAGCTTT AAGCCACATT AGAAACAATC GTGAAGCAAT GGACAAGATT GTTGAAATAC TTCTTGAGAA AGAGACAATG TCAGGCGATG AATTCCGAGC AGTCCTATCT GAATTCACAG AAATCCCACC TGAAAACCGT GTTGCTTCTT CAACATCCAC ATCAACACCG ACACCAGCGT CTGTCTGA 
Length2058
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G06430.1
DescriptionFTSH protease 8
TAIR curator summaryencodes a FtsH protease that is localized to the chloroplast
Alias[FTSH8][FTSH protease 8]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg479430 presequence protease 1
2.44949 Ahg479910 Protein kinase superfamily protein
3.87298 Ahg923463 FTSH protease 1
4 Ahg472530 SNARE associated Golgi protein family
5.47723 Ahg478103 Protein kinase superfamily protein
5.65685 Ahg477133 Protein kinase superfamily protein
6.9282 Ahg495156 CLPC homologue 1
7.74597 Ahg923930 methionine sulfoxide reductase B 1
7.74597 Ahg934924 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.21954 Ahg943249 ATP binding cassette protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression