| Annotation |
|---|
| Description | jgi|Araly1|495156|fgenesh2_kg.8__972__AT5G50920.1 |
| Sequence |
AGAGAGAGAG ATAAGGGAGG GTGAAACAAA ATAAGCACAC ACCACCATAT CCATCTGTTT TTTTTTTTCT TTTCATTTCT CTCTCTCTTC TTCTTCTTCG ATTCGTTTTT TCCTCCATTT GATCCTCTGT TACGCTTCAA TCGAACTCTG AAGTCATGGC TATGGCCACA AGGGTGCTGG CTCAATCTAC TCCACCATCT TTGGCTTGTT ACCAGAGGAA TGTTCCCTCA CGTGGATCTG GAAGATCGAG AAGATCGGTG AAAATGATGT GTAGTCAGTT ACAAGTTTCT GGCTTAAGAA TGCAAGGATT TATGGGATTA CGTGGGAACA ATGCTTTAGA CACTCTAGGA AAAAACCGTC AAGATTTCCA TTCGAAGGTG CGGCAGGCGA TGAATGTGCC CAAGGGGAAA GCTAGCCGGT TTACGGTGAA AGCAATGTTT GAAAGATTTA CTGAAAAAGC TATCAAAGTT ATTATGCTTG CTCAGGAGGA AGCTAGAAGA CTAGGCCACA ATTTTGTGGG AACCGAACAA ATTCTTCTAG GTCTCATTGG TGAGGGTACT GGAATTGCTG CTAAAGTTTT GAAATCCATG GGGATTAACC TTAAAGATGC ACGTGTGGAG GTAGAGAAGA TTATTGGAAG GGGCAGTGGC TTTGTTGCTG TTGAGATCCC ATTCACTCCT CGTGCAAAGC GTGTTCTTGA ACTCTCACTG GAGGAAGCTC GCCAACTTGG TCACAATTAC ATTGGATCCG AGCACCTTCT TCTTGGATTG CTACGTGAAG GTGAAGGTGT TGCAGCTCGT GTCCTGGAAA ATTTAGGTGC AGATCCTAGT AATATTCGCA CTCAGGTGAT ACGCATGGTG GGTGAGAACA ATGAGGTAAC TGCTAATGTT GGGGGAGGAA GCAGCAGCAA TAAGATGCCA ACTCTTGAAG AGTACGGGAC AAACTTGACG AAACTGGCTG AGGAGGGTAA ATTGGACCCA GTTGTTGGAA GGCAGCCACA GATAGAACGT GTGGTACAAA TTCTTGGCAG GAGAACCAAG AACAACCCTT GTCTTATTGG AGAACCTGGT GTTGGTAAGA CAGCTATTGC TGAAGGACTT GCGCAGCGTA TTGCCAGTGG AGATGTTCCT GAAACCATTG AAGGGAAGAA GGTTATAACA CTTGACATGG GTCTTCTAGT TGCTGGAACA AAATATCGTG GAGAGTTTGA AGAGAGATTA AAGAAGCTTA TGGAGGAAAT AAGACAGAGC GACGAGATAA TCTTATTTAT CGATGAAGTG CATACTTTGA TTGGGGCTGG AGCAGCGGAA GGTGCAATTG ATGCAGCTAA CATTTTAAAA CCAGCTCTCG CTAGAGGTGA ATTGCAGTGC ATTGGAGCGA CAACATTAGA TGAATACCGA AAGCACATTG AGAAAGACCC TGCGTTGGAA AGAAGATTCC AGCCGGTGAA AGTACCTGAA CCTACCGTGG ATGAAACTAT TCAGATTCTT AAGGGTCTGC GAGAGAGATA TGAAATTCAC CACAAGCTTC GTTACACTGA CGATTCTTTA GTAGCAGCTG CACAGTTGTC ATACCAGTAT ATTAGTGATC GTTTCCTTCC TGACAAGGCA ATTGACTTGA TCGATGAAGC TGGTTCTCGG GTTCGACTTC GTCATGCACA GGTCCCTGAG GAAGCTAGGG AGCTTGAGAA GGAGCTTAGG CAGATAACAA AGGAGAAGAA TGAAGCTGTC CGTGGCCAAG ACTTTGAGAA GGCTGGGACA CTTCGGGATA GAGAAATTGA ACTCAGAGCT GAGGTATCTG CTATCCAAGC GAAAGGTAAG GAGATGAGCA AAGCAGAGAG TGAGACTGGT GAGGAAGGTC CTATGGTCAC GGAGTCAGAC ATCCAACACA TTGTATCTTC ATGGACTGGT ATTCCCGTAG AGAAAGTATC AACTGATGAG TCTGATCGCC TCCTCAAGAT GGAAGAAACC CTCCACAAAC GTATCATAGG CCAAGACGAA GCTGTGAAAG CCATAAGCCG AGCCATTCGC CGTGCACGTG TTGGACTCAA GAACCCTAAC CGTCCAATAG CTAGTTTCAT ATTCTCGGGT CCAACCGGTG TTGGGAAATC CGAGCTTGCC AAAACTTTGG CAGCTTACTA CTTCGGCTCT GAGGAAGCCA TGATTCGTCT AGATATGAGT GAGTTCATGG AGAGGCACAC TGTCTCCAAA CTCATTGGAT CACCTCCTGG ATACGTCGGG TACACAGAAG GAGGTCAGCT AACAGAAGCA GTTAGGCGTC GCCCTTACAC CGTCGTTCTA TTCGACGAGA TCGAAAAAGC CCATCCAGAT GTTTTCAACA TGATGCTTCA AATCCTTGAA GACGGTAGAT TAACAGACAG CAAAGGAAGA ACAGTTGACT TCAAAAACAC ACTTCTCATC ATGACATCAA ACGTTGGAAG CAGCGTGATC GAAAAAGGAG GAAGACGTAT CGGGTTCGAC TTAGATTACG ACGAGAAAGA CAGCAGTTAC AACAGAATCA AGAGCCTTGT GACCGAGGAG CTGAAACAGT ACTTCAGACC CGAGTTCTTG AACAGGCTAG ACGAGATGAT TGTGTTCAGA CAGCTAACAA AACTGGAAGT GAAAGAAATT GCTGACATAC TGTTGAAGGA AGTGTTCGAG AGGTTAAAGA AGAAGGAGAT CGAGCTCCAG GTGACTGAGA GGTTCAAAGA GAGAGTAGTA GACGAAGGTT ATAACCCGAG CTATGGAGCG AGACCGTTGA GAAGAGCCAT CATGAGGCTT TTAGAGGATA GTATGGCAGA GAAAATGCTT GCGAGAGAGA TTAAAGAAGG AGACTCGGTG ATTGTGGACG TTGACGCTGA AGGTAACGTC ACGGTGCTAA ATGGTGGAAG TGGCACTCCA ACTACTTCCT TGGAAGAGCA GGAAGATTCT CTCCCCGTTG CTTGAATAAA AAAAAGGCAA AGTGCGTTTC TCTTCTTTTG CTTTGGCCCC TAAATGAATT ATGGCAAGAG AAGGTTATGA ATTGAGATAT TTGGGGGCTT TCTTAATATA CATTTTCTAA ATATATGAAA AAAATGTAAT GTATAGATGA CATTGTGTAG CTTCTTCTTT TCTTCCATGC TTTTTAAGGA CTTTGCTTTG GTG |
| Length | 3143 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13404056.. 13408840 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G50920.1 |
| Description | CLPC homologue 1 |
| TAIR curator summary | Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. |
| Alias | [ATHSP93-V][CLPC][CLPC1][DCA1][HSP93-V][CLPC homologue 1][DE-REGULATED CAO ACCUMULATION 1][HEAT SHOCK PROTEIN 93-V] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg479430 | presequence protease 1 |
| 2.44949 |
Ahg478309 | cell division cycle 48 |
| 2.44949 |
Ahg494796 | Insulinase (Peptidase family M16) family protein |
| 4.89898 |
Ahg923463 | FTSH protease 1 |
| 5.09902 |
Ahg494803 | FtsH extracellular protease family |
| 6 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| 6.16441 |
Ahg479029 | phospholipase D alpha 1 |
| 6.48074 |
Ahg919661 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 6.9282 |
Ahg910330 | FTSH protease 8 |
| 7.2111 |
Ahg482825 | cation exchanger 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|