Detail



ID : Ahg480601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480601|fgenesh2_kg.3__3302__AT2G17190.1
Sequence
TCATTTAATT GGCCGTTCGG GGCCAACAAA TAAGTCCTTT CTCTTTAATT CGCTGCAGTC TTCTTCATTT TTTATTCGAC CAAAATTTTT TTATATCCCT TTCCTCACGA AATCTCTAAA GAACCGACTT AGAGCTGGTT CGAGTCTCCT CAAATCTTCT TCTTCGATTT TTTTTCTAGG GTTAGAGATT TTAAGTCTCC GATCGATTTC GCGATTTGTT GAACTAGGAT CTGAAATTAG AATGGGTGGT GAAGCAGATT CGAGTCAGCC GCTGACTGCT GAAGGAGAAG CTGTTGCCGT GAACGTCCGG TGTTCCAATG GCTCGAAATT TAGTGTGACG ACGAGTCTCG ATTCGACGGT CGAGTCTTTC AAAGAGTTGA TTGCGCAGAA CAGCGATGTG CCAGCTAATC AGCAGCGTTT GATTTACAAG GGACGTATCC TCAAGGACGA TCAGACGCTT CTCAGCTATG GTTTGCAGGC TGATCACACC GTTCATATGG TTCGAGGTTT TGTGCCTTCT TCTCCTTCTG CTCCCGCTGC AAATGCTGGA AACCAAACCA CTGCTCCGCA AGCGGTTAGT TCAAATGATA CCTCAAACCT CGGAGGAGGG GAGTCTTTGT TCCCTGGGCT TGGATTTAAT CCTTTGGGTG GTGGAAATGC TATGGCTGGG TTATTTGGAT CTGGTCTTCC TGATCTTGAG CAGGCACAGC AACAACTAGC TCAAAACCCT AACATGATTA GAGATATGAT GAATACTCCA GCCATCCAGA ATCTTATGAA CAACCCAGAA TTTATGAGGA GTATGATTAT GAATAACCCT CAAATGCGTG AGCTTGTGGA TCGCAATCCT GAGCTTGGTC ATGTGCTCAA TGACCCAAGC ATCCTTCGTC AAACTCTAGA AGCGGCAAGA AACCCAGAGC TTATGCGTGA AATGATGCGG AATACCGATA GGGCTATGAG TAATATTGAG TCTATGCCTG AGGGATTTAA CATGCTTAGG CGTATGTATG AAAATGTTCA AGAACCGTTA ATGAATGCTA CCACTATGTC CGGGAATGCT GGAAGCAATA CAGGCTCTAA TCCATTTGCT GCTCTTCTGG GAAACCAGGG GGTCACTACA CAAGGAAGCG ACGTCTCTAA TAATACTTCG ACACCGAATG CTGAAACGGG TACACCTAAT GCAAATCCAC TTCCTAATCC ATGGGGTGCT ACGGCTGGCC AAACAACTGC CCCTGGAAGG ACAAATGCTG GTGGTGGACT TGGTGGTCTT GGTGGCCTTG CTGGTCTTGG TATGCTGGGA GCAGACTCAC CTCTTGGTGC GACTCCAGAT GCTTCTCAGT TGAGCCAAAT ACTGCAAAAC CCAGCTATGT CGCAGATGAT GCAAAGTGTA CTTTCCAATC CACAATACAT GAATCAGCTT ATGAGTCTCA ACCCGCAACT CCGAAGCATG CTAGATATGA ATCCTCAGTT GAGGGAAATG ATGCAGAACC CTGAATTCCT TCGCCAGTTT AGCTCTCCAG AGATGATGCA GCAAATGATG TCTCTACAAC AATCACTTTT CTCTCAGAAT AGGAACACGG TTGGCCAGGA TCCAACGCAA ACTGGTGCTG CGACAGGGAC AGCCAATAAC GGAGGGCTGG ATTTATTGAT GAATATGTTT GGCAGTCTTG GTGCTGGCGG CCTGAGTGGC ACAAACCAAC CCAATGTTCC TCCTGAAGAG CGATATGCGA CTCAGTTGCA GCAGTTGCAA GAAATGGGAT TCTACGACAG AGCAGAGAAC ATAAGAGCGT TGCTTGCAAC TAATGGCAAT GTTAACGCTG CTGTAGAACG ACTCTTGGGG AGTATTGGCC AGTAGCATAC AGGATCGTGA ACTTGTGGAT AGAAAAGCTG CGCATGGATA CAGTATTTGT TTTTAGTGGC CATCTTCTTT TTTTTACATA CTTTGGGTCG TCTGTTATCT TTCAGATTCT ATTTGAAGTT GTTACAACGT ACATCTGTAG AAGTTGATTT CGAAATGTGG AATGGTTACA TTTACGTTAT CTTTTCTCCA TTTATCTTAT AAATATAGCC GTTGTATACG TTGATAATTT GTGATAGATT AGAGCGGTCA TAAGCAATAG AAATTTTTCA TTCAAATAAC AAAGAAAAAT ACAGTA 
Length2156
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20659998.. 20663665
Download Sequence
A.thaliana
AGI-codeAT2G17190.1
Descriptionubiquitin family protein
TAIR curator summary
Alias[DSK2a]
Gene coexpression
MR
MR Locus Description
1 Ahg481680 P-loop containing nucleoside triphosphate hydrolases superfamily protein
1.73205 Ahg485174 B12D protein
2 Ahg482837 AMP deaminase, putative / myoadenylate deaminase, putative
2.23607 Ahg471269 S-locus lectin protein kinase family protein
2.64575 Ahg494809 Ubiquitin-like superfamily protein
2.82843 Ahg488386 U-box domain-containing protein
4.12311 Ahg926473 UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups
5.74456 Ahg897087 HOPM interactor 7
6 Ahg496212 PDI-like 1-4
6 Ahg919087 multidrug resistance-associated protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression