Detail



ID : Ahg911139

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911139|Al_scaffold_0001_1393
Sequence
ATGTATGTTA CAAGGCGTTT GTCAGAGTAC CAGAGAAATC CATCAGAGCT AACACAGCCT CCTCCTGATG GTCCAAACTC TGGAATTTTG GTAATCCAAG ACCAACACTC ACAAACACAT CCATGCTGCT TCGGCTTGTG TTTGGTCGTC GACTCTTTTC TAAGTGGTTT GCCCTTGCCG CAAAATCTTA AGCTCGCAGC CAGATTCAAT GCTGGAGAAG ATGACGCTAC TTGTGACCCA GTTCTGTTCA TTCCTGTTCT CGATAAGCCT CTATCTTCAA ACTCGAAGCG CCTGCTAGTG GGAAAGAGGA AGACAGAGTC CCCTGCTGCT TTTGCTAGTT ATGTTCCTGA AGCCAAACCA AAACAGGTAG ATCCTTATGA CATGTACCAA CAATTCATTA TCCATCAAAA GAAACCATCC TCGCGCTATT ACTACGCGAC ATCTGTTGCG CCTGACGGAG TCCCACCATG GTTCCTTAAG AAAAATAAGT GGACAGTTGA ATACTCGAGG TTCCAAGACT TTGAACTTAG AGATGATGCA AAAGGACTAA ACACAGAGTT TCGTACCGAG CTTCTTGGTC TTGGTATGAG TGTTGTGGTT GGGAAGTGGT ACGTCCCTTT TATATTTGTG AAGGAAAGAG ACGTAGAGGA TCAGATCAAG AGATCGATGT ACTACAGCAT GACTCTTGAA CAAAGATGGG AAGAAGTTTT CTTTTATGAG AACGATAAAA GCGAAAACCG TGATGTTGTA GTTGATGTGG AGTTAGATAC TGAAGTTGTT AAGGTTGATG GACAAGAGAT TGCAAGAGGT GTTGAAGCAA ATGGGTTTGT TTGGTTTGGG GTTGGAGAAC AAAAGATCGG TTTAGGATCA GTTGTTGTTG AGAGGATGAA ATGGGAAGAA GAGAGATTCG GGTGGACAGG CAAAGGCGAC AAGGAGCGAT CAATGACAGT TGAGAGATTG GAGAAATCAA CAGATGGTAG CTTTTGGAAG AGTTATCATT GTTATGTTCT GATAGAGAGC TTTGTCTTGA AGAGAATGGA TAAGAGTTTG GTCTTAACAT ATGATGATCC TCAGAACACA AAAGTCACTG TCAGATTCAA AGTCGGAAAG GCTGTCTTTC TTGACCCGGT CGCGTTCATC CCCGTTGTTC ATCAACCACC TTCATCTAAT CTTTACTACG TTATAAGGCA AAGCGGGAAT CACATAGGTG AAGCATGTGT TAGTGCAAAA GAAGGGGACA GAGCTTCTTG TTGCATGTGC TTTACTTATA TGCCTGATGC TGAACCAAGG CCTCTAGATC CTTTTGACAT AAACCAACAA TTTGAGATCC ATCAAAGTGG ATCATCAACC CAGAAGTTCT TTGCTACATC TGTTGCTTCA GACGGAATAC CACCTCAGTT CCTGACGAAA AAAGGTTGGG TGGTTATTTC CTTGCCTATC GAAGAAAATG CTTTGATTGA TGATGCAAAG GGAATAGTTG ACGCAAAGCT GCGCTATGAG TTTCCTGATT TCGATAAGAG CGTTGTAGTT GGGAAATGGT ATGTTCCCTT CTTATTTGTT AAGGATGGTG ATGCAAAAGA TCAGATGAAT AAATCAATGT ATTATAGTAT GACGCTTCAG CAAAGATTTG AAGAGGTTTT CTTCTGTGAA AACGTTGACA ACAATAAATA TCGTGAGGTT GTAGTTGATG TGGAGGTAGA AACAGAAGTG GTCAAGCTTG AAGGAGACAA GATTGCAAGA GAGATAAAAG GTGTGAATTC AGATGGAGTT GTGTGGTTTA GTGTCTCAGC GACTGATAAG ATTGGTCTTG GGTCTGTGGT CTTGGAGAGG ATGAAATGGG AAGAGGAGAG GTTTGGTTGG TCGAACAAAG GCGATGAACT AAGGTCTAGC ATTAAGAGAA CTGAGAAATT TGAAGACGGT GGACCGCATT GGAAGAGTTA TAGATGCTAT GTACTGGTAG AGAGCTTTGA ATTGAAGAGA GCTGATGGGA GTTTGGTATT GACATATGAG TTTAAACATG TTGATAAGTT GAAGAGCAAG TGGGATTGA 
Length2049
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5398939.. 5402515
Download Sequence
A.thaliana
AGI-codeAT1G13500.1
DescriptionProtein of unknown function (DUF1262)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.42615 Ahg493466 XB3 ortholog 4 in Arabidopsis thaliana
19.3649 Ahg327935 Cupredoxin superfamily protein
21.0238 Ahg480771
25.865 Ahg942355 carbon/nitrogen insensitive 1
26.5141 Ahg312036 Phosphoglycerate mutase family protein
26.9444 Ahg331636 Copper transport protein family
27.8388 Ahg894427 SPFH/Band 7/PHB domain-containing membrane-associated protein family
28.4253 Ahg485608 syntaxin of plants 122
29.2233 Ahg937488 Calcium-binding EF-hand family protein
34.7707 Ahg934718 Uncharacterised protein family (UPF0497)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression