| Annotation |
|---|
| Description | jgi|Araly1|912222|Al_scaffold_0001_2476 |
| Sequence |
ATGGCGGCGC AGGTCGAAAT TGAGGACCAA GCGTCTGTCA CCAACCTTGA TAATGGCGAA ATCTTCGATT CACTCTCCGA CGATGCTGAT TCTTCTTCTT TCTCCAAAAC CGACTCTCTG ATTCTTCTCG GTGAAGGAAA CCCAGAGCAC GATGTTATCA AGACGTGTTT ACTCTCTGGA ATGGGTGTTG TATCTAGCGA CACGACGATC GTGACGATTC GTAAAAACTC ATCGGAAGGA ATCACGACGA GAGCTAAGTT TCTTTCGTTT AGGATTTTCA CTGACGCTGT GGCGAGGAAA CACGGCGGAG ATGCGAATGT TAAATATGGT TGGTACGCTG GTTCTAAACC GGAGATTCAA AGTATCATCT CTTACGGATT TAGTAATCGT GATGTTGGAA AATTCGAGAA TGATGGTTGT TCTCATGGAA TTGGAATCCA TTTGGTTCCT TCTAAGTGTT CTCTTCTTGC GGCTTCAGCT ACAGAGCCAG ATGAGGAAGG TTTAAGATAT CTTCTCTTAT GCCGTTTGAT CTTGGGGAAA CCTGAGTTAA TCATCTCAGG CTCTAAGCAA TCGTATCCGA GCTCAGCTGA GTTTGATTCT GGTGTGGATG ATCTACACAA TCCTAGAAAC TATGTCATAT GGAGTTGTAA CATGAATTCG TTTATACTTC CGAGTTATAT CGTCAGTTTT AGGTCTCCTC GTCTTAGAGT AAGTAGAGGT GGTTTTGCTG CAAGACCAAG CTCGCCGTGG GTTAGTTTTG CCGCCTTGAT GTCAATGTTG TCTAAATCAA TGGATCCTTC AAGAATGAAC TTGATCATCC GAACTTACGA TGATTTTCGG AAACGGAAGA TCAGGAGAGA CCAATTGGTT AGGAAGATGA GAGAAGTGGC TGGAGACAAT CTTTTGGCTG AGATAATCAA GAATCACAGA GACAAAAACA AGATCAAGAA TTAA |
| Length | 954 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9930026.. 9931232 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G23550.1 |
| Description | similar to RCD one 2 |
| TAIR curator summary | Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. |
| Alias | [SRO2][similar to RCD one 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.94427 |
Ahg941255 | |
| 13.4907 |
Ahg922994 | related to AP2 1 |
| 24.3721 |
Ahg346366 | cytochrome P450, family 76, subfamily C, polypeptide 2 |
| 25.6125 |
Ahg924738 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
| 26.1151 |
Ahg950020 | Tyrosine transaminase family protein |
| 28.3725 |
Ahg325294 | Late Embryogenesis Abundant 4-5 |
| 29.1719 |
Ahg477545 | heat shock transcription factor A1E |
| 29.5127 |
Ahg495299 | CAP160 protein |
| 37.2425 |
Ahg921008 | cold-regulated 47 |
| 39.37 |
Ahg894415 | CBL-interacting protein kinase 25 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|