Detail



ID : Ahg934672

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934672|scaffold_402660.1
Sequence
ACCTATTGCT CCGATCAAAC ATGACATCAG TATCTCCATC ACACTTCGCT GATGTTGTAC GCAATGACGT TGATTTCCTG AAGAACAAAA TCGGCATCGG ACTCCGGTGG GCGAATGAGG CTTTTCGTGT ACCGGAAGTG ACTAAATCCG CTGAGGAATT GTTTTGGCTT CGGCATCTTG AGGATCATGC TTCTTCGAAT TTGGAGTCAC AATCTTGGCC TCAGCCTTCG TACTCAGGGC TCTCTGGGGT GGACTTGTTC ATGGCTGATG TCAAAGCTTT GGAGGCATAT GCTGCTTACT TTTACTGTCT TTCTAAGATG TGGTCAAGAC CACTTCCTGA AGTTTATGAT TCACAAGCTG TTGCAGATTA CTTTAATTGC AGGCCGCATG TCGTTGCCTT TAGGCTTCTC GAGGTATTTT CTGCGTTCAT GGTTGCTGCC ATCAGATTAC GAACATCAGC ATCAGACAAA AGCAAAAGTT TAGAAGCTTC AGAGCAGAAT TTTGGGATGG TGTTGAAAGA AACCATGCTA CATTTGGGTC CAACTTTTAT TAAAGTTGGT CAATCGCTTT CGACGAGGCC AGATATCATT GGGACTGAAA TCTCCAAGGC ACTATCTGAA CTGCATGACC GAATCCCTCC CTTTCCCTGG CCTGAGGCTG TAAAAATCAT TGAAGAGGAA TTAGGTGGTC CTGTCGAGTC ATTCTTTAGC CAGTTTTCTC AAGAAACTGT AGCAGCAGCA TCCTTTGGTC AGGTCTACCG AGGAAGGACT CTTGATGGTT CAGATGTTGC AGTGAAAGTT CAGCGCCCTG ATCTGAGACA TGCAGTGCTA CGCGACATTT ACATTTTGCG ACTTGGGTTA GGTGTATTAC GAAAGGTAGC AAAGAGAGAA AATGACATTC GTGTATATGC TGATGAGCTT GGAATGGGTT TGGCTGGAGA ATTGGACTTT ACTTTAGAGG CTGCCAATGC CTTGGAATTT CAGGAAGCTC ATTCACGATT TTCCTATATC CGGGTTCCAA AAGTATATAA GCATCTAACG CGCAAAAGAG TTTTGACCAT GGAATGGATG GTTGGTGAAA GCCCCACCGA TCTACTCGCA ATATCTTCTG GTTACTCTGA TCATGACAAT GAGAGTCATG AAAAGCAAAA AATGGAAGCG AGAAGGCGTC TTCTTGATCT AGTGAACAAA GGGGTAGAGG CAACACTAGT TCAACTCCTT GATACAGGTA TTTTGCATGC AGATCCGCAT CCTGGAAATC TGCGGTACAC AACATCAAGA CAAATAGGGT TTTTGGACTT TGGTTTAGTT TGTCGGATGC AAAGAAAACA TCAGCTTGCC ATGCTCGCAT CAATTGTGCA TATCGTAAAT GGTGATTGGG CCTTTCTTGT TGAATCTTTG ACTGATATGG ATGTCATCAC GCCAGGTGTT AATACCCGTC GTTTTACTCT GGATCTGGAA TATGCATTGG GAGAGGTTAA ACTTAGAAAC GGGATTCCTG ATATCGAGTT CACCAAGGTG CTTAGTAAAA TAGTCAAAGT GGCCCTGAAG TATCAGCTAC GCATGCCACC ATACTTCACA CTTGTTCTCC GTTCTCTTGC TTGCTTGGAA GTTATTTGCG TTCTATTTGT CTTCCCAGGT CTGGCTGCAA CTGGAGATCC AAACTTTAAG ACATTTGAGG CTGCATACCC TTTTGTGGTT CAAAAACTCA TCACTGAAAA TTCAGCTGCA ACAAGGAAGA TTCTTCATTC GGCAGTCCTT AACAGAAAGA AGGAATTCCG ATGGGAAAGG GTTGCTCTTT TCCTGAGTAA AAGTTCGACG AGGAAACAAT CGCCACTGGT AACGTTATCG AGGGATGAAA CTTCTGTTGA TAGTAGTTCC AATCCAACGG AAAAAGATGC TGACAATGTA AGTTTGGTCT TGAGACTTTT GGCATCCAAA AACGGTGTGG TTCTTAGAAG ACTCTTGATG GCTGCGAACG GGACTTCACT GATCCGGACA TTTATTTCAA GAGAGGCACA TGTCATCCGC CAGAAACTTT GCCTGACAAT TGCAAATACG ATGTACCAAT GGATGGTCGG AAGCCTCGGA ATTGAATCCC TTAAATTCAT CTCTCTTTCA GACCCACAAC TATCTTCAGG AATCAACATT ACAGTCAAAG ACTTCAAGAT TCTGATACGC GACAAACGTG TCAGAGTGAT ACTGAGAAAG ATACTGGAGT CTGCAAAGAG TGACCGAATT TTGATGCTCA GATTCTGCTG GACTTCTTTT GTCATGTCTC TCACAACCAC TGCTCTCGCT TGCCATCGGT TTGTTATATC GGTCTCTGAA GGTTACGTCA ACTACTTATC TTTGTCTGCT CCAGTTGCAC TTCGTACCTG AACATCTCAC ACCAACACAG A 
Length2401
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18033906.. 18040271
Download Sequence
A.thaliana
AGI-codeAT2G39190.2
DescriptionProtein kinase superfamily protein
TAIR curator summarymember of ATH subfamily
Alias[ATATH8]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg475455 shaggy-like kinase 42
6.32456 Ahg472512 Tetratricopeptide repeat (TPR)-like superfamily protein
6.85565 Ahg496646 Inositol monophosphatase family protein
9.8995 Ahg480607
12.1244 Ahg483939 photolyase/blue-light receptor 2
12.3288 Ahg489087
13.0767 Ahg488823 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein
14.6969 Ahg476621 plastid transcriptionally active 2
14.7986 Ahg921636 TCP-1/cpn60 chaperonin family protein
16.9706 Ahg912571 Protein of unknown function (DUF3506)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression