Detail



ID : Ahg913379

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913379|Al_scaffold_0001_3633
Sequence
ATGGGGAAAT GCCTAGCTTT GATGATCTTC CTCTCTTCTT CTCTTCTTTT TGTCCTTCAA AACCTCGAAG TCGTTAACGC AGTCAGGTGT TCCGGAAGCT TCTTCAAAGG TAACAGCAGC TACAGCGAGA ATCGCCACAA GCTCTTCTCT ACTCTTGCTA ATAAAGTCGT CACCAACGGT GGATTCTACA ACGCTTCACT CGGTAAAAGT CCCAACACAG TTTACGCTCT TGTCCTTTGT GCAAGAGGTT ACCAGCAACA AGCGTGTTCC AGTTGTGTCG AAAAAGTGAC TCAGGGGACA CAATCGAGTT GTCCAGATCG CATGGATACG TTCAAGTGGG ACAATGACGA CGAAGACCAT GTTTCTTGTC TTGTACGTTC CACAAACTAC TCAACTTTAG GGACGCTCCA GCTTGGACCT CCTGTTATAT TCCCAAGTCC ACTTAGTATA GATCCATCCA GGGACATGAC CCTTTTTAAA CAACAGCGGG AAACAACGGT TAATCGGACC CTTGAGGCTG CCACCAAAGC TGAAAATTCC TCGGTAATTA AGTACTATAG TGCGGTACAA GCCGAGTTCA CGGAGTTTCC AAATGTTTAC ATGCTGATGC AATGCACACC AGACATATCT TCCCGAGATT GCAAGAGATG TTTGGGAGAT TGCGTGACGT ATTTTACAAA ACAGTTTTGG GGAAGGCAAG GAGGAGAGGT TAGTCGTCCG AACTGTGTTT TCAGGTGGGA TCTATATGCG TTCCATGGTG CTTTTGATAA TGTAACAAGA GTTCCTGCAC CTCCTCAACA AGTAAAGGGG AGTTCTATAA CAGAAAAGAA AGGAAGAAGC ATTGGCTATA ACAAAATTAT TGCGATAATT GCGGTTCCTA CTTTCATTAA TATTTTGGTG TATATTGGTC TCATAAAAGT CTATGCTTGG AGAAGAAAAT CAAACAACGG AATAGATGTT GGTAGGGCAG AGTACTCTGA TTCTGATGGA CAATTTATGT TACGGTTTGA TCTTGGTATG ATCTTAGTGG CAACTAATGA CTTTTCGTCT GAGAATACGC TTGGCCAGGG TGGATTTGGT ACTGTCTATA AGGGGACATT ACTAAACGGG CAAGAGATAG CCGTGAAGAG ACTAACAAGA GGTTCGGGGC AAGGAGATAT GGAGTTTAAG AATGAGGTTT CTCTATTGAC AAGACTCCAA CATAGGAATC TGGTTAAGCT TCTTGGGTTC TGTAATGAAG GAGATGAAGA GATTCTTGTT TACGAGTTTG TCCCCAATTC AAGTCTTGAT CACTTTATCT TCGATGAAGA GAAGCGTTCG CTTCTTACAT GGGAGCTGAG ATGCAGAATT ATAGAAGGCA TTGCTCGAGG TCTTCTTTAT CTCCATGAAG ATTCTCAGCT GAAGATTATT CACCGAGACT TGAAGGCAAG CAACATTCTT TTAGACGCTG AGATGAACCC TAAGGTTGCC GACTTTGGGA CAGCGAGATT GTTCGAAGCT GATGAGACTC GAGCTGAAAC AAGACGAATA GCTGGAACCC GTGGGTATAT GGCTCCCGAA TACCTGAATC ACGGACAAAT CTCAGCTAAA TCTGACGTTT ATAGCTTTGG TGTTATGCTT CTAGAGATAA TAAGTGGTGA AAGAAACAAT AGCTTCGTAG GAGAAGGACT TGCCGCTTTT GCATGGAAGA GATGGGTTGA AGGAAATACT GAGAGTATAA TTGATCATTT CTTGATAGAT CGGCCAAGAA ACGAGATCAT TAAGTTGATC CAAATTGGTT TGTTGTGTGT TCAAGAGAAT GCAGCAAAGA GACCAACCAT AAGCTCTGTT ATAGTTTGGC TTGGTAGTGA AACTATCATC ATTCCTTTAC CTAGAGCTCC TGCTTTCACT AGAAGTCAAT CTCAATCTGA GAATGGTATA AGGTCAATGA GCGATGATGT CTTCACGGAG TTGAGTTGTC GTTGA 
Length1965
Protein Sequence
Protein Residue
Map Locationscaffold_1: 16173265.. 16175766
Download Sequence
A.thaliana
AGI-codeAT4G04540.1
Descriptioncysteine-rich RLK (RECEPTOR-like protein kinase) 39
TAIR curator summaryEncodes a cysteine-rich receptor-like protein kinase.
Alias[CRK39][cysteine-rich RLK (RECEPTOR-like protein kinase) 39]
Gene coexpression
MR
MR Locus Description
13.6015 Ahg923732 PLAC8 family protein
19.5959 Ahg909804 plant U-box 54
23.4094 Ahg947849 Calcium-binding EF-hand family protein
23.8118 Ahg484989 C2H2 and C2HC zinc fingers superfamily protein
31.4643 Ahg482026 OSBP(oxysterol binding protein)-related protein 1A
36.3318 Ahg494895 Glutamate receptor family protein
43.1509 Ahg909901 gibberellin 2-oxidase 6
48.2494 Ahg485937 exocyst subunit exo70 family protein H1
50.06 Ahg921472 Matrixin family protein
51.4976 Ahg312409 fucosyltransferase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression