Detail



ID : Ahg914913

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914913|Al_scaffold_0001_5167
Sequence
ATGGACGCTG ATTCCAAGAG ATTTCTAGCT ACGCTTCGAT CCCGATCTGA AATGTTAATG GGCTTTGAAG AAATAGATGG AGATGATGAT TTCCAGGAGG AGTTTGCTTG CCCGTTCTGT GCAGAATCGT ATGATATCAT CGGTTTGTGT TGTCACATAG ATGATGAACA TACTTTAGAG TCAAAGAACG CGGTGTGCCC TGTTTGCTCT CTAAAAGTGG GAGTTGATAT CGTAGCGCAC ATAACGCTTC ACCATGGGAG TTTATTTAAG TTGCAGCGAA AGAGAAAGTC ACGGAAAAGT GGTACCAATT CGACACTTTC ACTTCTTCGG AAAGAGCTAA GAGAAGGAGA TCTACAGAGG TTGTTAGGAT TTACTTCTCG TAATGGTTCT GTTGCATCAA GTGGAACTCC CGATCCTCTC CTGTCGTCAT TTATCTCACC TACACGATCA CAGAGTTCTC CTGTGACACG CCAAACCAAA AAAGTATCCG AGGAGAAACA GATAGAGCGC AAGAGACAAG TGTGCATCTC ACCGGTCTCA TCAAAAGATC GGGAAGAGAG GAGGCAAAAA TCAGAGTTTG TTCAGAGGCT CTTGTCATCA GCCATTTTCG ATATGGTCTA A 
Length621
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30486602.. 30488121
Download Sequence
A.thaliana
AGI-codeAT1G56280.1
Descriptiondrought-induced 19
TAIR curator summaryEncodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal
Alias[ATDI19][DI19][drought-induced 19]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg479130 translationally controlled tumor protein
2.44949 Ahg475701 ADP-ribosylation factor A1E
3.4641 Ahg481806 CAX interacting protein 4
5 Ahg493242 homolog of yeast ADA2 2B
6.9282 Ahg483251 Integrase-type DNA-binding superfamily protein
7 Ahg471034 glucose-6-phosphate dehydrogenase 4
9.38083 Ahg480885 HSP40/DnaJ peptide-binding protein
11.4455 Ahg946720 vesicle-associated membrane protein 724
13.784 Ahg928429 Far-red impaired responsive (FAR1) family protein
13.9642 Ahg474234 A20/AN1-like zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression