Detail



ID : Ahg915411

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915411|Al_scaffold_0008_162
Sequence
ATGGTTGCAA TACCCAAACT TAGGATAAAG TTTGGTCCTC AAGGTTCTGT CAGAACATTC CAAACGTTTC CTGGTAGTTC AAAGAAAATT GAGCATTCAC TTGGTGAAGA GCAATCGAAG AAGCGTGGAC CTGAAGAGCT AGAGGATGTT CAAGCTAAGA AGAAGCAGAA GCTAGATTGT GATTGGTCTA GTCAGTGTTT GGCATTGTTA CGTTTTTTGA TGGAGCACCG TGTTGGTTGG CTCTTTGAAG AGCCTGTGGA TCCTGTTAAA TTGGAGATTC CTGATTACTT CTCTGTCATA CGAAAGCCAA TGGATTTAGG CACTGTCAAA TCAAAACTTT TGAAGAATGT GTATAGTAAT GCTGATGAGT TTGCAGCGGA TGTTCGGTTA ACTTTTGCCA ATGCGATGCG GTATAATCCT CCGGGCAATG AGGTTCACAC GATTGCAAAG GAGATTAAGG AGATTTTTGA GGTTAGATGG AAATTACTCA AGAAGAAAAT GGTTTCGAAA TTGTCCGGGG TTGAAGTTAC AGAAGGTTCT AAGAGGCAGC CTGTTGAGTT CGATTGTTCC AGACAGAGCA GCCCTGGAAC ATCAGCTTGC TCTGGGGTTT TCTCCGCGGG ATCGACAAAA CCAGCAAAAG AAAACTCCGC TCTTTCGTCA AAGCCAGTGA AAGCGCAGAG CAAAAAGGAT ACTCCTGCTG TGACGCCGAA AGCATTATGT AAATGTGGTT CATGTGGTAG GATTATTTGC ATATGCCTCA AGTCCTGTAG CTCATCTGGA AGTGAAGTTT CTTCATTAAC GGATTGTCAA GTAAAGAACA TTTCAGGTGC ACAAGCGAGC GAGTCAGATC CTCAATCCAA TGGGTCTGTG ACTTCAAAGA ATGAGAGAAA TGGTAGTGTC AATTCTCAGC TTGATAAACC TTCAAACAAT GCTCTGTTGG ATAATGAGTT GAAAACAACT TTTCCTGCTC TGCCGCCGGT ACCTCCTGAG AAAGCTCTTC GTGCTGCAAT ACTCAAAGCT CAATATGCAG AGACCATTCT AAAAGCTAAA CACAGAGTAG TCCTTGACCA GAATAACAAA GCTGATCTAA TTAGACTACA GATAGAAAAG GAACAGATGG AAAGAGCACA ACGTGAAGAG AAAGCTAGAA TTGAAGCCGA GATGAGCGCT GCTAAGGTAG CTGCCCGAAT GAGGGCACAA GCCGAGTTGA AACAAAAACG TGAGACACAA CGGCTTGAAC TAGCAAAGAT GAAAAAAGGC TTCGATTTTG AACAGAACAA CCACTTGAAA TTGGAGAAAG ATTTCGTTGA AGTCTGTGGA TGCTCTAGTC TGACAAGAGC TCGGTTGTTA CTAAGAGAGT TGGGTCTGGT TTTAAGAAGT GATGATCGTC CGGAACTGGA AGAGATCGGG TCAGAAAATT TTGATGCAAT GAGAATCGAG GATCTTGAGG AAGGAGAGAT CCTTTAA 
Length1467
Protein Sequence
Protein Residue
Map Locationscaffold_8: 815469.. 817628
Download Sequence
A.thaliana
AGI-codeAT5G46550.1
DescriptionDNA-binding bromodomain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg483938 spliceosomal protein U1A
9.79796 Ahg332111 FRAGILE HISTIDINE TRIAD
21.6795 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
25.9037 Ahg936061 mucin-related
26.533 Ahg929695 Protein of unknown function, DUF599
26.8328 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
37.47 Ahg934539 CAX-interacting protein 2
44.8999 Ahg485482 VPS35 homolog C
45.5192 Ahg494737 Zinc finger C-x8-C-x5-C-x3-H type family protein
46.8828 Ahg492627 SWIB complex BAF60b domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression