Detail



ID : Ahg915414

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915414|Al_scaffold_0008_165
Sequence
AATGAAGAGA AGGGACAACA AGGTGAAGCC AATGGTGGAG CATTTATTAG AAAGTCCATC TATGGTGTTG GGATCCATTT AACTGCTGCA GACTGCCCTT ACTTCAGTGC TAGATATTGT GATGTTGACA AAAACAGAGC ACGTTACATA GATTGTGATG GTGACAAAAA CGGAGTTCGT TACATGGTTT TATGTCGTGT AATAATGGGG AATATGGAGC TCCTTCGTGG TGATAAAGCT CAATTCTTTT ATGGTGGAGA AGAATATGAC AATGGAGTCG ATGATATCGA GAGTCCAAAG AATTACATTG TCTGGAACGT CAATATGAAC ACTCATATAT TCCCCGAATT TGTTCTTATG TTCAAGCTGT CTAATCTCTC CAATACTGAA GGTAATTTGA TTGCTAAGCG TGAAGTTGCT GCGTTGCTTA GAAACAATGA TGAAGACAGA CCTCGAGCAA GTCCTCAATT TTCTTTGCAA CTTCGTTTGT TTCTGCTCCC ATCCTCCACC GGCCCAATAC CAATTAGCGT AACCTGTGAG GGTTTCTGGT TTCACTTTCT ACGCCTACTC TGA 
Length573
Protein Sequence
Protein Residue
Map Locationscaffold_8: 840697.. 841678
Download Sequence
A.thaliana
AGI-codeAT1G32230.1
DescriptionWWE protein-protein interaction domain protein family
TAIR curator summaryEncodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.
Alias[ATP8][AtRCD1][CEO][CEO1][RCD1][ARABIDOPSIS THALIANA P8 (INTERACTING PROTEIN)][RADICAL-INDUCED CELL DEATH1]
Gene coexpression
MR
MR Locus Description
15.2643 Ahg905723 Tetratricopeptide repeat (TPR)-like superfamily protein
16.0935 Ahg482319
27.1293 Ahg952246
37.47 Virus3732
38.2623 Ahg925214 protein phosphatase 2CA
40.2989 Virus3111
43.1277 Ahg948858
53.5817 Ahg478610 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
57.0964 Ahg357047
67.838 Ahg918714 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression