Detail



ID : Ahg915426

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915426|Al_scaffold_0008_177
Sequence
ATGCGTAATA TCCGTTTCCT AGAAATAAAG AAATGTCTTT CCAAAGAAGT CAATTTGCAC TTACCTGAAA GCTTCGACTA TTTACCCCCT AAACTTAAAC TATTGTGTTG GCCCGATTAT CCAATGAGAT CTATGCCTAC TACGTTTAGT CCTAAAAACC TCATCAAGAT CAAAATGCAG TTTAGCAAGC TAGAAAAGCT ATGGGAAGGA GTTGCGTCGC TTACATGTCT CAAGGAAATG GATTTGTATG GATGTGCATA CTTGAAAGAA ATCCCAGATC TTGCTATGGC AGTTAATCTG GAAACACTTA TTCTTGTGTT TTGCGTGAGT TTGGTAAAGC TTTCTTCCTC AGTACAAAAT CTCAACAAAC TGACGACATT GGACATGAAG TTCTGCATGA GTCTGGAGAC TCTTCCAACC TTCATTAACC TCAAATCTCT CAACTACCTT GATCTCAAAG GATGCTTGCA GTTGAGGAAT TTACCTGAAA TCTCAATCAA AATCTCAAAG CTAATTCTAA ACGATACAGC CATTGAACAA ATCCCTTGTA ATTTGCGTCT TGAGAATCTG GTTGAGCTTC AAATGAAAAA CCTAATGGGT GAGAAACTAA GGAAAGGGGT GCAGCCGCTT ATGCCCCTCC AGGCGATGCT GTCTCCCACT TTGACGAAGT TGCAGCTAGA GAATATGCCA AGTTTGGTGG AGCTTCCTTC TTCGTTTCAG AATCTCAATC AACTAAAATA TTTGCACATC CAATACTGCA TAAATCTAGA GACTCTGCCC ACCGGAATCA ACCTCCAATC TCTCGATAGC CTTAGTTTCA AGGGATGCTC ACGGTTGAGG AGCTTTCCTG AAATCTCAAC CAACATCTCA AGTCTCGATC TAGACGAAAC AGGGATTGAA GAGGTTCCTT GGTGGATCGA GAACTTCTCT AACCTTGGTT TGCTAAGTAT GGATCGTTGC AGCAGGCTAA AATGTGTATC CTTACACATT TCTAAACTGA AACATCTTAA GAAAGCTTAC TCTTCTGATT GTGGGGCATT GACTAGAGTT GATTTGAGTG GATATGAAAG TGGGGTGGAG ATGATGGAAG CAGACAATAT GTCCAAGGAG GCCTCTTCTT CTCTTCCTGA TAGTTGTGTC CCCGATCTCA ATTTCTGGGA CTGCTTCAAC TTGGATCCAG AAACTATCCT GCGCCAACAA TCAATTATTT TCAATTACAT GATATTTCCA GGGAAAGAAG TGCCATCATA TTTCACTCAT CGTACAACCG GAATCTCCTC TCTAACCATC CCTCTACTCC ATGTTCCTCT CTCCCAGCCA ATCTTCAGAT TTAGGGTTGG TGCAGTGGTA ACTAATAATG ACGAAGTACA TATAAAGGTA AAATGTGAGT TCAAAGACAT ATGTGGGAAC AGCTTTGATG TCTGCTCTGA TTTCTATGTT TATACAAATT ACAAGGAAGT TCGGGAGGGT GGTCATATGT TAACTATATT GGACTGTCGT ATCCCCCTAA ACGAAGATAA TGCTCCCCTA GCTCAACGGG ACTACGATCA CGTGGATATG CAGATTGATG CAAGTGATGA TTGTATAAAA GGATGGGGTA TACGACTCTT AGAAGACTGT TCATCACCGG AGAACCAACT TGGTAATCTA ATCAATATTA AAGGACTTGT GAAGTCTGGA GACATCAATG TAGAGACAGA GAGAAGCAGA AAGCGAATGC GGGGTAACAC AAAAATCTGC TGCGATGTAC TTATGCCAAT CTGCAAGATC ACTCGATATC ACTTTGAATC TTCGATTGCC AATCTAGAGC CCGAGTTAGA TTTATTTTTG ACTTCAAGTT CAATATGGAC CCAATGCTAT GTGGAACTTC CATTTATCTT TGGACATGTT TTTCAAGCTG ATGAAAGCAA TAGAGACAAC GAGCCTGAAT ACGTTGAAAA ATCTGGAGAC AGAGAGAAAA GGAAACAAAT CAAGATAACT AGGCATTAG 
Length1989
Protein Sequence
Protein Residue
Map Locationscaffold_8: 959449.. 963558
Download Sequence
A.thaliana
AGI-codeAT1G31540.2
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.1187 Ahg492857 VACUOLAR SORTING RECEPTOR 7
30.8869 Ahg344161 Plant Tudor-like protein
35.5246 Ahg475116 WRKY family transcription factor
38.8458 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
44.5421 Ahg887308
50.4975 Ahg322779 Protein of unknown function (DUF707)
50.8035 Ahg477093
51.7107 Ahg470845 Surfeit locus protein 5 subunit 22 of Mediator complex
56.9912 Ahg481829 glutamate receptor 2.8
59.8498 Ahg887884 glutamate receptor 2.7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression