| Annotation |
|---|
| Description | jgi|Araly1|915648|Al_scaffold_0008_399 |
| Sequence |
ATGGCCGATA GTGAGCAATT GGTCTGCATC AGCTGCGTAT CTGAGGTACG GTACTCTTTC GTGAGCCACC TCTCCGAAGC TCTCCGCCGG AAAGGCATAA ATAGTGTGAT CATAGATGTA GATAGCGATG ATCTGCTTTC CAAGGAGTCG CAGGCAAAGA TCGAGATATC TAGCGTTTCT GTGATGGTTT TATCCAGAAT CTGTGAGCCA ACTAGAGTAT GCCACAACTT CGTGAAGGTT CTCGAGTGCC AGAGGGACAA GAACCATGTG GTGGTTCCTG TGTTGTACGG CGAGAGTCCA TTACTGGGCG AATGGCTCAG CGTGCTGGAT TTGAGAGATT TATCACCAAT TCACCAATCC AGGAAGGAAT GTAGTGACTC CCAGCTTGTA AAAGAGATTG TCAGAGATGT GTATGAGAAG CTCTTTTATA AGGGACGAAT TGGAATCTAT TCGAAGCTGC TGGAGATTGA GAAAATGGTT TGCAAGCAAC CGTTGGGCAT CCGTTGTGTT GGAATTTGGG GTATGCCTGG CATAGGCAAG ACGACACTTG CTAAAGCGGT CTTTGACCAA ATGTCTGGCG AATTTGATGC TTCTTGTTTT ATCGAAGACT ATAGCAAAGC TATTCAAGAG AAGGGTGTTT ATTGTTTGCT GGAGGAACAA TTTTTGAAAG AAAATGCTGG TGGTGCTGGT GGTACCGTTA CGAAATTGAG CTTGCTTAGA GACAAATTAA ACAATAAGAG AGTTCTTGTT GTTCTCGATG ATGTGCGTAG TCCTCTGGTT GTGGAGTCTT TTCTTGGAGG GTTTGACTGG TTTGGTCCCA AAAGTCTAAT CATCATAACC TCCAGAGATA AATCGGTGTT TCGCCTTTGT CGAGTCAATC AAATATATGA GGTTCACGGT TTAAATGAGA AAGAGGCTCT TCAGCTATTC TCTATGTGTG CGTCTATAGA CGATATGGCA GAGCAGAATC TCCACGAGGT GTCAATGAAA GTTATTAAAT ATGCTAATGG CCATCCATTA GCTCTCAGTC TCTATGGCAG AGAGCTGAAG GGTAAGAAAA GACCGCCAGA AATGGAGACA GCATTCCTCC AACTCAAGGA ACGTCCTCCA AATATTTTTG TTGATGCAAT CAAGAGCTGC TATGACACAC TCAATGACAG GGAAAAAGAT ATATTTTTGG ACATAGCTTG TTTCTTCCAA GGAGAAAATG TTGACTACGT GATGCAAGTG CTTGAGGGTT GTGGTTTCTT TCCACATGTT GGAATCGATG TTCTTGTAGA GAAGTATGTT GGCCGACATA TAATAAATAG AGAAACAAGA CAGACTAAGA GGCGCGACAG ACTGTGGGAA CCTTGGAGCA TCAAATATTT ATTAGAAGAT AACGGAGAAA AAGAAAATGG AGAACACAAA ACAACTTTGG AACGTGCTCA GGGCCCTGAA GAGATCGAAG GCATGTTTCT GGACACATCA AACTTTAGTT TTGATATTAA GCCTGCTGCC TTTGATAATA TGTTGAACCT TAGATTGCTC AAGATTTACA GTTCCAATCC TGAAGTCCAT CATGTAAAGA ATTTCCTCAA AGGCTTTCTC AATTCTCTTC CTAATGAGCT AAGACTCCTC CATTGGGAGA ACTATCCTCT GCAGTTTCTG CCCCAAAATT TTGATCCTAT ACACCTTGTT GAAATCAACA TGCCGTACAG CCAACTTAAG AAACTTTGGG GTGGAACCAA GAACCTGGAG ATGTTGAAAA CTATCAGGCT TTGTCATTCC CAGCAACTAG TTGATATTGA CGATGTTTTA AAAGCTCAAA ATCTTGAGGT AATTGATCTC CAAGGTTGTA CAAGACTGCA GAGTTTCCCA GCCACAGGTC AATTGCTACA TCTACGAATT GTAAATCTCT CTGGTTGCAC AGAGATCAAA AGTTTCCCAG AGATTCCCCC AAATATTGAG ACACTGAATC TACAGGGGAC TGGTATAATA GAATTACCAC TTTCCATTAT TAAGCCAAAC TACACAGAGC TTTTGAATCT TCTAGCTGAA ATCCCGGGTC TTTCAGGAGT CTCAAACCTT GAGCAAAGTG ATCTCAAACC TTTAACAAGC CTGATGAAAA TGAGCACATC TAATCAAAAT CTTGGCAAGC TTATTTGCTT GGAGCTGAAA GATTGTGCTC GTTTGCGAAG TCTGCCAAAC ATGAATAATT TAGAACTTCT CAAAGTTCTT GATCTTTCTG GTTGCTCAGA GCTCGAGACT ATCCAGGGTT TCCCACAGAA CCTGAAAGAG TTATATCTTG CTGGCACTGC AGTAAGACAA GTGCCACAAC TTCCTCAAAG CTTAGAACTC TTTAATGCAC ATGGTTGTGT CTCTCTCAAG TCAATTCGTG TGGACTTCGA GAAGCTTCCT GTGCATTACA CACTTAGTAA TTGTTTTGAT CTCTGTCCAA AAGTGGTCAG CAATTTTTTA GTGCAAGCGC TGGCTAATGC GAAACGCATA CCAAGAGAGC ATCAACAGGA ACTCAACAAA ACTTTGGCTT TCAGCTTCTG TGCGCCCTCA CATGCGAATC AAAATTCCAA ACTTGATCTG CAACTAGGAT CTTCTGTAAT GACACGACTA AATCCTTCTT GGAGGAACAC ACTTGTGGGC TTTGCTATGC TGGTGGAAGT CGCATTTTCG GAGGATTACT ATGATGCTAC TGGTTTTGGC ATTAGTTGTA TTTGCAAATG GAAAAACAAG GAAGGCCACT CTCATAGGAT AGAAAGAAAT TTGCATTGTT GGGCTCTAGG GAAAGCTGTT CAAAAGGATC ATATGTTTGT CTTCTGTGAT GACAACTTGC GTCCAAGTAC TGATGAAGGA ATTGACCCCG ATATCTGGGC TGATTTAGTT GTCTTTGAGT TCTTTCCTGT CAACAATCAG ACAAGGCTTC TAGGTGATAG TTGCACAGTG ACAAGATGTG GAGTCCGTGT AATAACTCCT CCAAACTGCA ATACAAGTCT CGAGATATCA TCATCAGTTT TGTCCTTAGA TCCGATGGAG GTTTCTGGTA ATGAAGGTGA AGAAGTATTG AGAGTCAGTT ATGATGGTTT ACAGGAGATA GATAAAGCTT TATTTCTTTA CTTAGCAGGT TTGTTCAATG ATGAGGATAT TGATTTGGTG GCACCACTTA TTGCCAACAT TATTGACATG GACGTCAGTT ATGGGCTCAA GGTCTTAGCC GATAGGTCTC TCATACGTGT ATCTTCCAAT GGGGAAATAG TGATGTACAA TTTGCAACGA GAAATGGGTA AAGAAATCCT CCATACAGAA TCAAAGAAGA CTGACAGATT GGTCGACAAT ATTCAGACTT CCATGATCGA TTCAAAGGAA ATCGAGATCA CTCATTCAAA GAATCGCCGA AAGAAGAGCA GGGCAAAGAA AGTGCTTTGG TCCATTGAAG AAGTAGCTGA CCAATGGGTT TGGCGAAAGT ACGGTCAAAA ACCCATCAAA GGTTCTCCTT ATCCAAGGAA TTACTACAAA TGTACCAGCT CCATAGGTTG TTCAGCTAGG AAACAAGTCG AACGTAGCCG CACCGATCCA AACATGTTAG TCATTACTTA CATCTCTGAG CATAACCATC CATCCCCCAC TCAACGCAAT GCTCTTGCCG GCTCCACTCA TTCCCCGTCA TCCTCCAAAT GCTCAGCTGT AACTACTTCT GACTCATGTA GAGTCTCCCA ACACAAAGAC GAACCGGATA AATCCCATTT GCCTTCCTCT CCCGCTTCTC CTCCTTATGC GGCCATGGTG ATTAAGGAGG AGGACATGGA GCGGCGGGAC AATATGGAGT TCGATGATGA CGTTGAAGAT ACCTTAATAC CGGAATTATT TCCAGAGGAT TTCTTCGCTG ATCTCAACAA GCTTGAGTCG AATTCTCAGA CTATGTTTCA ATCTCACAGT AGCAGCGGAG GCAACATGGA AAACCAAGGG CGGAACTCTA GTAGTGATGA TATGGGGGCC AATTTACCTA ATAAAACTCT GTGA |
| Length | 4014 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2422800.. 2427691 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45050.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Encodes a member of WRKY Transcription Factor (Group II-e) that confers resistance to tobacco ringspot nepovirus. |
| Alias | [ATWRKY16][TTR1][WRKY16][TOLERANT TO TOBACCO RINGSPOT NEPOVIRUS 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.14143 |
Ahg491759 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 12.8062 |
Ahg479265 | pyrimidine 1 |
| 15.3948 |
Ahg483704 | TCP family transcription factor |
| 16.1864 |
Ahg471266 | Seven transmembrane MLO family protein |
| 17.5499 |
Ahg484812 | Leucine-rich repeat (LRR) family protein |
| 19 |
Ahg480961 | Protein of unknown function (DUF803) |
| 27.2029 |
Ahg943453 | |
| 28 |
Ahg927989 | peroxin-12 |
| 29.3258 |
Ahg939309 | RING/U-box superfamily protein |
| 33.3617 |
Ahg917653 | type one serine/threonine protein phosphatase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|