Detail



ID : Ahg927989

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927989|scaffold_300446.1
Sequence
GAGATTGGAG GAAGAAGAAG ATGTTGTTTC AGGTGGGAGG TGAAGGCACA CGCCCCACCT TCTTTGAGAT GGCTGCTGCT CAGCAACTCC CGGCTAGCCT TCGCGCCGCT CTCACCTATT CCCTCGGCGT TTTTGCTTTG AGACGATCGT TTCTCCATAA GATTTTAGAT TATGAGGATG AATTCTTTGC TGCTCTCATG CTTATTCTTG AAGGACACAG CTTACGAACC ACAGATGCTT CCTTTGCTGA ATCATTGTAT GGTTTGAGGA GGAAATCGGT GAGATTGAGA TTGAGGAAAG ACAGTGTCAG GAAGGATTCC GGCGAAGAAG TTCAACATTC TGGTTTAGAG AAGCGCCAGA GAATCCTTTC TGTTGTGTTT CTGGTTGTAT TACCGTATTT CAAGTCAAAA TTGCATGCTA TCTATAATAA AGAAAGAGAA GCTAGGCTCC GGGAAAGTTT ATGGGGAGCA GAGGATCCAG GATTTGATGA AGCTGACTTC TTTACTGGGG ATGATTCAAT TGTTTCAAGA GAGCCTAGTG GGAATGAAGA GCTTTCTGTT CGAGTACAAT TAGCTACCAA AATAAAAAAG TTTATAGCTG TCTGCTATCC TTGGATACAT GCATCAAGTG AAGGATTATC GTTCACTTAC CAGCTCTTAT ATCTGCTGGA CGCTACTGGA TTTTATTCTC TTGGGCTACA AGCTCTTGGG ATTCAAGTTT GTCGAGCTAC AGGGCAAGAA CTGATGGATA CATCATCAAG AATTTCAAAG ATACGGAATC ATGAGCGTGA GAGACTTCGT GGTCCTCCAT GGTTAAAAAC AGTGCAAGGG GCACTTCTTA GCTGCTCATA TGCTGTGCTT GACTACGCCC AAACCGGTCT GATTGCAGCA GTTTTTATCT TTAAAATGAT GGAATGGTGG TATCAATCAG CTGAAGAAAG ATTATTAGCT CCAACAGTGT ACCCTCCACC TCCACCTCCT CCAGCCCCAA AGATGGCGAT AGAAGGAATC CCTCTACCTC CCAACAGATC CCTCTGCGCG TTATGCTTGC AAACACGTGC AAACCCATCA GTTGTCACAG TCTCTGGATT TGTTTTCTGC TACTCATGCG TATTTAAGTA TGTTTCAAAG TACAAGCGAT GTCCGGTGAC ATTGATTCCG GCCAGTGTGA ATCAGATTAG GAGGTTGTTT CATGACACTT AATACCAATC TATTTAATTG TT 
Length1222
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1407356.. 1409925
Download Sequence
A.thaliana
AGI-codeAT3G04460.1
Descriptionperoxin-12
TAIR curator summaryRING finger protein involved in peroxisome biogenesis. Also involved in peroxisomal import of nitric oxide synthase.
Alias[APM4][ATPEX12][PEX12][ABERRANT PEROXISOME MORPHOLOGY 4][PEROXIN-12][peroxin-12]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg492266 C2H2-like zinc finger protein
5.47723 Ahg488524 Chaperone DnaJ-domain superfamily protein
9.38083 Ahg947127 Haem oxygenase-like, multi-helical
12.7671 Ahg938459 mitogen-activated protein kinase phosphatase 1
20.4939 Ahg936128 uvrB/uvrC motif-containing protein
23.4947 Ahg917653 type one serine/threonine protein phosphatase 2
28 Ahg915648 Disease resistance protein (TIR-NBS-LRR class)
30 Ahg934902 cytochrome P450, family 98, subfamily A, polypeptide 3
33.0454 Ahg925208 binding
35.3695 Ahg473420 heat shock transcription factor A1D
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression