Detail



ID : Ahg492127

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492127|fgenesh2_kg.7__1560__AT4G26750.1
Sequence
GGGATTTTAG AGGCCCTCTC TGCGACGTCG TTTATAGTTT GCAATCAGAA GCGCGTCAAA TAAAGGAAAA TTTCTTGAGC TCTTGTCTGT CTTAACAAAT CAATCGGAGA AGAGAGAATC TATGTCGAAC GCAAACGAAC CAGCCAGGGC TCTTCTACCT TACCTGCAAC GTGCCGATGA GCTGCAGAAG CATGAACCAC TTGTTGCTTA TTACTGTCGG CTATATGCCA TGGAACGAGG ATTGAAGATT CCGCAGAGCG AGAGAACTAA GACCACCAAT TCAATTCTCA TGTCTCTCAT TAATCAACTT GAAAAGGATA AGAAATCATT GAATCTGTCC CCAGATGACA ATATGCATGT GGAGGGGTTT GCATTAAGTG TCTTTGCAAA GGCAGACAAG CAGGATCGTG CAGGAAGAGC TGACTTGGGC ACTGCCAAAA CTTTTTATGC TGCGACAATC TTCTTTGAAA TTCTGAGCCA GTTTGGCCCT GTACCTCCTG ATATAGAGCA GAAACAGAAG TATGCTGCTT GGAAGGCTGC TGACATAAGG AAAGCCATTA AAGAAGGAAG GAAGCCCACT CCAGGTGATC CTGTTGATGA TGAAAATGAT TTATCCATCC CATCAAGCGG TCCTAGTGGC TCCTATGATC ACGGTGCAAG TGATTCCAAC ACAACAAATC ATCATAGAAC AGAGCCTGAT CCATCCCATG ACTCGAATGA TGACTCCAGC CAACATCACT TCCCTGAAGT GCCACAACAC CCTCTACCTC CCAGGTTTCA TGACAATCCT ACCAACGATT ATCCCACAGA TGTCCCGCCT CCACCACCGT CTTCTTACCC TTCCAACGAT CTCCATCCCC CTCCCACGGG ACCATCAGAC TCCCCTTACC AGCATCCTTA CAGTCATCAA CCATACCACC AAGACCCGTC ACAACACATG CCGCCACCAC AAAACTACTC AGCCCATGAG CCTTCTCCAA ATTCTCTCCC CAATTTCCAA TCTTATCCTA GCTTTAGTGA GAGCAGCCTC CCATCCACTC CTCCCCACTA CCCTTCTCAC TACCAAAACC CAGAACCTTA CTATTCTTCT CCGCATTCCG CACCTGCTCC TTCTTCCACA AGCTTCTCCT CTGCTCCTCC TCCTCCACCT TACTCATCAA ACGGGCGTAT CAATATTGCT CCTGTGCTAG ATCCTGCACC GAGTCCAGCT CAGAAGTACC ATTACGACAG CAGCTACCAG CCAGGGCCTG AGAAGGTTGC AGAGGCACAC AAGGCTGCTA GATTCGCTGT GGGAGCTTTG GCTTTTGATG AAGTCTCGAC TGCTGTAGAA CATCTGAAGA AGTCACTTGA GTTGCTAACA AATCCATCGG CCGGTGCCGG TCACTGAATT TTATATTTAA TCTATGAAAC TTGGGGTTGA TGTTAGTGTG TGTGTGTGTT AACTTTTCAG GCTCAGACTT CGTGTACAAA GAAAAATTGT GTGAATTATT CTTATTATCA TTAACTTTTC TTTGC 
Length1515
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6050768.. 6053494
Download Sequence
A.thaliana
AGI-codeAT4G26750.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias[EXT-like][extensin-like]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg933950 NAD(P)-binding Rossmann-fold superfamily protein
2.82843 Ahg928964 Ubiquitin-conjugating enzyme/RWD-like protein
4 Ahg944390 high-affinity nickel-transport family protein
5.65685 Ahg318717 Radical SAM superfamily protein
9.38083 Ahg920383 DYNAMIN-like 1C
10.5357 Ahg490214 glucan synthase-like 5
13.4164 Ahg485927 LisH/CRA/RING-U-box domains-containing protein
15 Ahg492998 SCAR family protein
15.4919 Ahg478740 mitogen-activated protein kinase kinase kinase 7
15.8114 Ahg342616 AAA-type ATPase family protein / ankyrin repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression