Detail



ID : Ahg478454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478454|fgenesh2_kg.3__1155__AT3G11130.1
Sequence
CTCCCCTTAT ATTCGACGAG TGACTCCGAT TGGATCGCTG TTTCGTCATT TCTCACTTTC TAAAGAAAAA CGAATCTCTC TCCACCATCA TTACCTTTCT CCTTCACTTG CCTCAGATCT GGCTGCGATT TCAAATCTTC TTTAGTTTCT CTCGCCGCGA TCTGAGGTCA AACATGGCGG CGGCTAACGC GCCCATCATC ATGAAGGAGG TCCTAACGCT TCCGAGCGTT GGGATCGGTC AACAGTTCAT CACCTTTACA AATGTTACTA TGGAGTCTGA TAAGTACATA TGTGTACGAG AGACGGCACC ACAAAACAGT GTTGTAATTA TCGATATGAA TATGCCGATG CAGCCTCTAA GGAGACCTAT AACTGCTGAT TCTGCTCTTA TGAACCCAAA CTCGAGGATC CTTGCCTTAA AAGCTCAAGT TCCAGGAACT ACTCAGGATC ATCTACAGAT ATTTAACATC GAAGCAAAAG CAAAGTTGAA GTCACATCAG ATGCCTGAGC AGGTTGCTTT TTGGAAGTGG ATCACACCAA AGATGCTGGG GCTGGTCACG CAAACTTCTG TGTATCATTG GTCGATTGAA GGTGATTCTG AGCCAGTTAA GATGTTTGAT AGAACGGCCA ATTTGGCAAA CAATCAAATT ATAAACTATA AGTGCTCTCC TAATGAGAAG TGGTTGGTCT TGATTGGAAT TGCTCCTGGC TCTCCTGAGA GACCACAATT GGTAAAAGGA AATATGCAGC TTTTCTCGGT GGATCAACAG CGGAGCCAGG CCCTTGAAGC GCATGCTGCG TCATTTGCTC AGTTTAAGGT CCCTGGGAAT GAGAATCCTT CTATTCTTAT ATCCTTTGCA AGCAAGAGCT TTAATGCTGG GCAGATAACA TCAAAGTTGC ACGTTATTGA ACTTGGTGCC CAACCGGGAA AACCATCATT TACAAAAAAG CAGGCAGATC TCTTTTTCCC CCCAGATTTT GCTGATGATT TTCCTGTGGC CATGCAGGTC TCTCACAAGT TTAACTTGAT TTATGTCATC ACCAAGCTTG GCCTGCTGTT TGTATATGAT CTAGAGACAG CTTCTGCTAT CTACAGAAAT CGGATAAGTC CGGACCCAAT TTTCTTAACG TCTGAAGCTT CCTCAGTTGG GGGTTTCTAT GCCATTAATA GGCGAGGACA AGTTCTTTTG GCAACCGTAA ATGAGGCCAC CATAATACCT TTTATTAGTG GTCAATTGAA CAATTTGGAA CTTGCTGTCA ATCTTGCTAA AAGAGGAAAC CTCCCTGGTG CAGAGAATCT GGTTGTCCAG AGGTTCCAAG AGTTATTTGC TCAAACAAAG TACAAGGAGG CTGCTGAGCT TGCTGCTGAA TCTCCTCAGG GCATTCTACG GACACCTGAT ACGGTGGCCA AATTCCAGAG TGTTCCTGTA CAAGCAGGGC AAACTCCTCC ATTGTTACAG TATTTTGGGA CCCTTTTGAC TAGAGGGAAG CTCAATACAT ATGAGTCTTT GGAACTATCT CGGCTTGTTG TGAATCAAAA CAAGAAGAAC CTCTTGGAAA ACTGGTTAGC CGAGGATAAG TTAGAATGCA GTGAAGAACT CGGAGACCTT GTCAAGACTG TGGATAATGA CCTTGCTCTA AAAATTTACA TCAAAGCTAG AGCTACTCCA AAAGTCGTTG CAGCTTTTGC AGAGCGAAGG GAGTTTGACA AAATACTGAT TTATTCAAAG CAGGTTGGGT ACACACCTGA TTACATGTTT CTTCTGCAAA CGATACTTCG TACGGACCCT CAGGGAGCAG TAAATTTTGC TTTAATGATG TCCCAAATGG AAGGAGGTTG TCCAGTTGAC TACAACACTA TCACTGATCT TTTCCTTCAG AGAAATCTGA TCCGTGAAGC CACTGCTTTC CTTCTGGATG TTCTGAAGCC AAACTTACCC GAGCATGCTT TTCTGCAAAC TAAGGTTTTG GAGATCAATT TGGTAACCTT TCCTAATGTG GCTGATGCAA TCTTAGCAAA TGGGATGTTC AGCCATTATG ACAGGCCTCG TGTTGCTCAG CTTTGTGAAA AGGCTGGACT TTACATCCAA TCCTTAAAGC ATTACTCAGA GTTACCTGAT ATCAAACGTG TAATTGTTAA CACACATGCT ATTGAGCCAC AGGCTCTTGT CGAGTTTTTC GGTACTCTTT CTAGCGAGTG GGCTATGGAG TGCATGAAAG ATCTCCTGTT GGTCAACCTG AGAGGCAACC TTCAGATAAT CGTTCAGGCT TGCAAGGAGT ACTGTGAGCA ACTTGGTGTC GATGCATGCA TTAAACTCTT TGAGCAATTC AAGTCATACG AAGGGCTGTA CTTTTTCCTA GGTTCATACT TGAGTATGAG TGAGGATCCT GAGATTCACT TCAAGTACAT CGAAGCAGCT GCCAAGACTG GTCAAATAAA GGAGGTTGAG CGTGTGACTA GAGAGTCTAA CTTTTATGAT GCTGAAAAGA CGAAGAACTT TTTGATGGAA GCTAAGCTTC CTGATGCCCG ACCTTTGATA AATGTCTGCG ATCGTTTTGG CTTTGTGCCT GATCTTACTC ATTACCTCTA CACAAACAAC ATGCTGCGTT ACATTGAAGG TTACGTTCAG AAGGTAAATC CTGGGAATGC TCCCTTAGTT GTGGGGCAGT TGCTTGATGA CGAATGCCCT GAAGATTTTA TAAAAGGCCT CATTCTTTCT GTTCGTTCAT TACTTCCTGT TGAACCCCTT GTTGATGAAT GTGAAAAGAG AAATCGACTC CGTCTCCTTA CTCAGTTCTT GGAGCATCTA GTTAGTGAGG GAAGCCAAGA TGTGCATGTC CATAATGCCT TGGGTAAAAT TATCATAGAC AGTAACAACA ACCCCGAGCA TTTCCTGACC ACCAATCCTT ACTACGACTC TAAGGTTGTG GGTAAGTACT GCGAGAAACG TGATCCCACT CTGGCCGTCG TGGCATACAG AAGAGGACAA TGTGACGAGG AACTCATCAA TGTCACCAAC AAGAACTCTT TGTTCAAGTT ACAAGCCAGG TACGTAGTGG AGAGGATGGA TGGTGACCTC TGGGAGAAGG TTCTTACGGA AGAAAATGAA TATAGGAGGC AACTTATCGA CCAAGTTGTG TCTACTGCTT TACCAGAAAG CAAGAGCCCA GAGCAAGTTT CTGCAGCTGT TAAAGCATTC ATGACTGCTG ATCTGCCGCA TGAGCTTATT GAGCTTCTTG AAAAAATTGT GCTTCAAAAT TCTGCCTTCA GTGGAAATTT CAATCTGCAA AATCTGCTTA TACTGACAGC TATTAAGGCA GATCCGTCTA GAGTTATGGA TTACATTAAC AGGCTGGATA ATTTTGATGG TCCAGCGGTT GGAGAAGTGG CGGTTGATGC TCAATTGTAT GAGGAAGCAT TTGCGATTTT CAAGAAGTTT AACTTAAATG TTCAGGCTGT CAACGTATTG TTGGATAACG TCAGAAGCAT TGAGCGTGCT GTTGAGTTTG CTTTCCGGGT CGAAGAAGAT GCTGTTTGGA GTCAAGTCGC TAAGGCTCAG CTCAGGGACG GACTAGTCAG TGATGCTATT GAGTCCTTTA TCCGAGCTGA TGATGCCACT CAGTTCCTGG AGGTCATCCG CGCCTCTGAA GATACTAATG TCTATGATGA CTTGGTCAGA TACCTTTTGA TGGTTAGACA GAAGGTGAAG GAACCCAAGG TGGATAGTGA GCTCATCTAT GCTTATGCAA AGATTGAAAG GTTGGGTGAG ATTGAAGAAT TTATTCTGAT GCCCAACGTT GCCAACCTTC AAAATGTTGG TGACCGTTTG TATGATGAAG CTCTGTATGA GGCTGCAAAG ATAATATATG CATTCATATC GAATTGGGCC AAGTTAGCCG TCACCCTTGT GAAGTTGCAA CAGTTCCAAG GTGCTGTTGA TGCTGCAAGG AAAGCAAACA GTGCAAAGAC ATGGAAGGAA GTCTGCTTTG CTTGTGTTGA TGCTGAGGAA TTCCGACTGG CCCAAATCTG TGGACTTAAC ATTATCATAC AGGTGGATGA CCTGGAAGAA GTAAGCGAGT ACTACCAGAA CAGAGGATGC TTCAATGAAT TGATCTCACT TATGGAGAGT GGACTTGGTC TGGAACGTGC TCACATGGGG ATCTTCACCG AGTTGGGTGT ACTGTACGCT AGATATCGTT ATGAGAAGCT TATGGAACAC ATCAAGTTGT TCTCGACGCG GCTCAATATT CCCAAGCTTA TCCGGGCCTG TGATGAACAA CAGCATTGGC AGGAACTTAC CTATCTTTAC ATTCAATATG ATGAGTTTGA TAATGCTGCA ACCACTGTCA TGAATCATTC TCCTGAAGCA TGGGAACACA TGCAATTCAA AGACATTGTT GCCAAGGTTG CGAATGTTGA GCTTTACTAT AAGGCCGTTC ACTTCTACTT GCAAGAGCAC CCTGATATAA TCAACGATCT TCTCAATGTG CTTGCTCTGC GGTTAGATCA CACTCGTGTC GTTGATATTA TGCGCAAGGC TGGTCACTTG CGCCTTATCA AGCCATACAT GGTTGCAGTT CAGAGCAATA ATGTCTCTGC TGTAAATGAA GCTCTGAATG AGATATATGT AGAAGAAGAA GACTATGACA GGTTGCGCGA GTCTATTGAT TTGCATGACA GTTTTGACCA GATAGGTCTC GCCCAGAAGA TTGAGAAACA CGAGCTTGTT GAAATGAGGC GTGTGGCTGC TTATATCTAC AAGAAAGCTG GTAGATGGAA GCAATCGATT GCTTTATCAA AGAAAGATAA CATGTACAAG GACTGTATGG AAACTGCTTC GCAATCCGGC GACCATGATC TTGCAGAACA ACTTCTCGTC TACTTCATTG AACAGGGGAA AAAGGAATGC TTTGCTACAT GTCTCTTTGT CTGTTATGAC TTAATCCGAC CAGACGTTGC TCTAGAACTT GCTTGGATCA ACAATATGAT AGACTTTGCC TTCCCGTATC TCCTCCAGTT TATCCGAGAA TACTCTGGCA AAGTGGATGA GCTAATCAAG GACAAGCTGG AGGCACAAAA AGAGGTGAAG GCCAAAGAAC AGGAAGAGAA GGATGTCATG TCCCAACAGA ACATGTACGC CCAATTATTG CCATTGGCTC TACCTGCCCC TCCGATGCCA GGAATGGGAG GTGGTGGGTA TGGTCCGCCA CCACCAATGG GCGGAATGCC AGGAATGCCT CCAATGCCAC CGTATGGAAT GCCTCCAATG GGCGGCTACT AAGGTCAGAA TGTTTCCTTC TTTGGTTTCG TTTTATAGGG TATGTGTGGA TAATAAACTT GCTTTCGTTT GTAATATTCT TTGGGAGTCT TTAGGTGAGT CATTTTTG 
Length5388
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4200021.. 4209541
Download Sequence
A.thaliana
AGI-codeAT3G11130.1
DescriptionClathrin, heavy chain
TAIR curator summary
Alias[AtCHC1][CHC1][clathrin heavy chain 1]
Gene coexpression
MR
MR Locus Description
1 Ahg928500 Clathrin, heavy chain
1.41421 Ahg485507 Malectin/receptor-like protein kinase family protein
1.73205 Ahg471140 dynamin-like protein 6
2.82843 Ahg479149 TOPLESS-related 2
3.16228 Ahg489126 Adaptor protein complex AP-2, alpha subunit
3.74166 Ahg940194 TUDOR-SN protein 1
4.47214 Ahg485406 Transducin/WD40 repeat-like superfamily protein
5.65685 Ahg344116 chromatin remodeling factor CHD3 (PICKLE)
8.48528 Ahg472400 Calcium-binding EF hand family protein
8.83176 Ahg948265 Basic helix-loop-helix (bHLH) DNA-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression