Detail



ID : Ahg920656

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920656|scaffold_101937.1
Sequence
TAAAAATTTC CCCGAGAGAA AATGCAGAGG TTAAAGCAGC AGCAGCAACA GCAACAAGTT ATGATGCAGC AAGCTCTTAT GCAGCAACAG TCTCTCTACC ATCCGGGTCT CCTTGCCCCG CCACAGATAG AACCAATCCC AAGTGGAAAT CTCCCCCCTG GTTTTGATCC AAGTACTTGC CGCAGTGTGT ATGTTGGAAA CATCCATATT CAGGTGACGG AACCTCTGCT TCAAGAGGTT TTTGCTAGCA CTGGTCCTGT AGAAAGCTGT AAACTAATTA GGAAAGAAAA GTCTTCATAT GGGTTTGTCC ACTACTTTGA TCGAAGATCG GCTGGTCTTG CAATTCTTTC TCTCAATGGA AGGCATTTGT TTGGGCAACC TATCAAGGTT AACTGGGCTT ATGCTAGTGG CCAGAGGGAG GATACCTCAA GTCACTTCAA TATATTTGTT GGGGATTTGA GTCCGGAGGT TACTGATGCA ATGCTGTTTA ATTGCTTCTC TGTCTACCCG AGTTGCTCGG ATGCAAGAGT TATGTGGGAT CAGAAAACTG GGCGTTCAAG AGGATTTGGA TTTGTTTCGT TCCGTAACCA GCAGGATGCC CAGACTGCAA TAGATGAAAT AACTGGGAAA TGGCTTGGTT CCAGGCAGAT ACGCTGCAAC TGGGCGACAA AAGGAGCCAC TTCTGGTGAG GACAAACAGA GCTCTGATTC CAAAAGTGTC GTGGAACTTA CCAGTGGTGT CTCGGAGGAT GGTAAAGATA CTACTAATGG TGAAGCTCCT GAGAACAATG CTCAGTACAC GACTGTTTAC GTCGGTAATC TTGCTCCAGA GGTGTCTCAG GTTGATCTTC ACCGCCACTT TCATTCCCTC GGTGCTGGGG TCATAGAGGA AGTCCGTGTT CAAAGAGACA AAGGTTTCGG ATTTGTGAGA TACTCTACTC ATGTAGAGGC AGCCCTCGCT ATTCAGATGG GAAATACGCA TTCCTACCTC AGTGGCAGGC AAATGAAGTG TTCTTGGGGA AGCAAGCCAA CTCCACCAGG AACAGCTTCA AACCCGCTTC CTCCACCAGC TCCTGCACCA ATCCCGGGAT TCTCAGCCAG CGATCTCTTG GCTTACGAGA GGCAACTAGC GATGAGCAAG ATGGCAGGAA TGAATCCGCT GATGCATCAC CCGCAGGGAC AACATGCTCT TAAACAAGCT GCAATGGGAG CCACTGGCTC AAACCAAGCA ATATATGACG GTGGTTTCCA GAACGCGCAG CAGCTCATGT ACTACCAGTG AGATCTTCCT TGGAGCCGTA TT 
Length1302
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6928503.. 6931550
Download Sequence
A.thaliana
AGI-codeAT1G17370.1
Descriptionoligouridylate binding protein 1B
TAIR curator summary
Alias[UBP1B][oligouridylate binding protein 1B]
Gene coexpression
MR
MR Locus Description
2 Ahg933190 Pleckstrin homology (PH) and lipid-binding START domains-containing protein
4 Ahg486804 NPL4-like protein 1
10.4881 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
12.3288 Ahg491014 Serine carboxypeptidase S28 family protein
14.9666 Ahg474270 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
14.9666 Ahg927966 Tetratricopeptide repeat (TPR)-like superfamily protein
16.9115 Ahg486817 MIRO-related GTP-ase 2
19.4422 Ahg478823 RNA-binding (RRM/RBD/RNP motifs) family protein
20.0499 Ahg470730 Thioredoxin superfamily protein
22.2036 Ahg939499 prenylated RAB acceptor 1.B5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression