Detail


ID : Ahg927966

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927966|scaffold_300423.1
Sequence
TATAATTTCA TTAAGAAGCG ATGATCTCGT CGAAAAACGG AGCTGCGATG ATCTCTCGAC CTGTGTTTCT TTCGGATCGA GTTGATGAAG TCTTCTCTAG AAAGCTTGAT TTGTCTGTTT CTTCTTCGTC TTCTTCGAGT CTCCTCCAGC AGTTCAATAA AACTCATGAA GGGGATGATG ACGCACGCCT GGCTCTTGCT CATCAGCTGT ACAAAGGAGG AGATTTCAAA CAAGCCCTAG AGCACAGCAA CATGGTTTAC CAGAGAAACC CATTACGTAC TGATAATCTT CTTCTGATTG GTGCTATTTA TTACCAGCTC CAAGAGTATG ATATGTGCAT AGCTAGAAAT GAAGAAGCTC TTCGTATTCA ACCTCAGTTT GCTGAGTGTT ATGGAAACAT GGCAAACGCG TGGAAGGAAA AAGGGGACAC TGATCGTGCA ATCCGCTACT ATTTAATTGC AATTGAGCTG AGGCCCAACT TTGCTGATGC TTGGTCGAAC TTGGCAAGTG CATACATGCG AAAGGGAAGA CTCAGTGAGG CAACACAATG CTGTCAGCAG GCCCTTTCAT TGAATCCACT TCTGGTTGAC GCACATAGTA ATCTGGGGAA TCTGATGAAG GCTCAAGGAT TGATTCATGA AGCATACAGT TGTTACCTTG AAGCTGTTCG TATACAACCA ACATTTGCTA TTGCATGGTC GAATCTTGCT GGTCTTTTCA TGGAGTCAGG TGATCTCAAC AGAGCCCTTC AATACTACAA GGAAGCTGTG AAGTTGAAAC CTGCATTCCC TGATGCATAT TTAAATTTAG GAAACGTGTA TAAGGCTCTT GGAAGACCTA CAGAAGCTAT CATGTGTTAT CAGCATGCCT TACAGATGCG GCCAAATTGT GCAATGGCAT TTGGGAATAT AGCCAGTATA TACTATGAGC AAGGTCAACT GGATTTAGCA ATTCGACACT ACAAGCAGGC TATCTCCCGG GATCCACGAT TTTTGGAGGC TTATAATAAC TTGGGTAATG CATTGAAGGA TATTGGGCGA GTTGATGAAG CAATTCGGTG TTATAATCAA TGTCTTGCTT TACAACCAAA TCATCCACAA GCAATGGCTA ATCTTGGAAA TATTTATATG GAGTGGAATA TGATGGGTCC TGCTTCCTCA TTATTCAAGG CTACTCTGGC TGTAACTACA GGGCTATCTG CTCCGTTCAA TAACCTTGCT ATAATTTATA AGCAACAGGG AAATTACTCG GATGCTATAT CCTGCTATAA TGAGGTTCTT CGTATTGACC CATTGGCAGC TGACGCTCTG GTTAATAGAG GCAATACTTA CAAAGAGATC GGGAGGGTAA CTGAAGCTAT TCAGGATTAC ATGCATGCTA TTAATTTCCG GCCTACAATG GCTGAAGCTC ATGCAAACCT GGCCTCAGCT TACAAGGATA GTGGGCATGT GGAAGCTGCC ATTACGAGCT ATAAGCAGGC CTTGCTACTA CGACCAGACT TCCCAGAAGC AACGTGCAAC CTTCTGCACA CCTTACAGTG TGTATGCTGT TGGGAAGACC GTAGCAAAAT GTTCGCTGAA GTTGAAAGCA TTATTAGGAG GCAAATAAAT ATGTCGGTCC TTCCAAGTGT CCAGCCCTTC CATGCAATAG CATATCCTAT TGACCCTATT CTTGCCCTTG AAATCAGTCG TAAATATGCT GCACACTGCT CCATAATCGC TTCTCGTTTT GGACTACCTC CTTTTACCCA TCCAGCTGGG CTCCCTGTAA AACGTGAGGG AGGATTTAAG AGATTAAGGA TTGGATATGT GAGCAGTGAT TTTGGTAACC ATCCATTGTC ACACCTCATG GGATCAGTGT TTGGGATGCA CAACAGAGAA AACGTTGAGG TTTTCTGCTA CGCATTGAGT GCAAATGATA ATACTGAGTG GAGACAGCGT ATCCAATCAG AAGCCGAGCA TTTCCTGGAC GTTTCTTCTA TGTCATCTGA TGCTATCGCC AAAATTATAA ATGAAGACAA AATCCAGATC CTCATCAATC TAAACGGTTA TACCAAGGGG GCTAGAAATG AAATATTTGC CATGCAGCCT GCACCGATCC AGGTTTCATA TATGGGCTTC CCAGGTACAA CTGGGGCAAC CTATATTGAC TATCTAGTGA CTGATGAGTT CGTGTCTCCT CTGCAATATG CACATATTTA CTCAGAGAAG CTGGTCCATC TTCCCCATTG CTACTTTGTC AATGATTACA AGCAGAAAAA TCAGGATGTG TTAGATCCAA ATTCTAAGCC CAAGAGATCA GACTATGGAC TTCCTGAAGA CAAATTCATA TTTGCATGCT TCAACCAACT GTACAAAATG GATCCTGAGA TCGTTAATAC TTGGTGCAAC ATTCTTAAAC GAGTACCCAA CAGTGCTCTT TGGCTTCTCC GTTTTCCAGC AGCCGGAGAG ATGAGGTTTC GCACATATGC TGCTGCCCAA GGTGTACAGT CTGATCAAAT TATCTTCACT GATGTTGCCA TGAAGAGTGA ACATATCAGG CGAAGTGTCC TTGCTGATGT AATCCTCGAC ACGCCTCTGT GCAATGGACA CACAACAGGA ACAGATGTGC TGTGGGCTGG TGTACCGATG ATAACATTAC CACTTGAGAA AATGGCAACT CGAGTGGCTG GATCACTCTG TCTTGCAACT GGTCTGGGCC ATGAGATGAT AGTTAACAGC TTGGAGGAGT ACGAAGAGAA GGCTGTCTCT TTGGCACTGA ACAAGCCAAA ACTTCAGGCA CTGACTAAGG AATTGAGGGC TAGCCGCTTA ACCTGTCCTC TATTCGACAC CATGCGTTGG GTGAAGAATC TGGAGAGGTC GTACTTCAAA ATGTGGAACC TCCATTGCTC TGGACAGCAG CCACAACACT TCAAGGTGTT GGAAAACGAC CTAGAATTCC CACATGACAG ATAAACAACG AGGGAAAGAA AACTG
Length2975
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G04240.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summaryHas O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.
Alias[SEC][secret agent]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg931532 transportin 1
3.74166 Ahg477469 6-phosphogluconate dehydrogenase family protein
5.83095 Ahg486382 multidrug resistance-associated protein 14
9.48683 Ahg479701 UDP-Glycosyltransferase superfamily protein
10.3923 Ahg491267 RING/U-box superfamily protein
10.8167 Ahg478479 Protein of unknown function (DUF604)
10.9545 Ahg355042 pleckstrin homology (PH) domain-containing protein
14.9666 Ahg920656 oligouridylate binding protein 1B
15.9687 Ahg318458 calmodulin binding;transcription regulators
16.9411 Ahg488966 ubiquitin 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression