| Annotation |
|---|
| Description | jgi|Araly1|920834|scaffold_102115.1 |
| Sequence |
TGATATTCAT TTTTCAGAGA AATGATACGC CCAAAGCATA TTAGTAACCT CTCAAGTACA GCAAGATCCT TTTTTCTGAA TGGATCGAGA ACAAGTGTAG CTGACGGGAA TTCGTGTGCG TACACGGACG ATGAAACTTG TGTCTCGAGA CGTCAGCAAC TTAGGAAGGA AGCTGCACAG ACTGAAAAAC GACCATCCAG TATTCTCCCA AAGCCTTCAG TTGTGGGATG TATATTACCA GGAGAGGTAA CTAAACCAGT GGTTCCAAAG AAGGTTGATG ATTTTGGTCG GCCATCTCTA TTGCCACAGC ATGTTTCTTC TTCCCCTGCT TTGCCGCTTA AATCAAATTC GGTTAATTAT GCATCAACCA TCATTAGAGA GGAGGTGGAA GGTAAAGCTT CTTCAGAACC TATTGGGGAT CAGATTTTTA AGGCCGGTAT TGTAGCAGTA AATTTTCTGT CAGATTTAGC GAATTGTAAG ATTCCTTCGT ATGATGGAGG AAGTGAGGCA TTTGGATTAC CGAAAAGCTG TATGGTTGAT CCAACACGGC CTATTTCAAG TGTCAAGTCG TCGAATGTGA AAGCTATAAG AAGAGAGCAC TTTTCCAAAG TTTACCCTAG ATCAGCTGCA AAAGAGTCGT CAATCGGTAA AACTAGAAAT CCCAGTAGCA ATTTCCGAGG GGCCAAGGAA GCTGAAAGAA CTGGATTTGT TAAAGGATTC AGACAAGTTT CTAATTCTGT GGTAGGAAAG TCATTACCCA CAACAAATAA CACATATGGC AAGAGGACAA GTGTGTTGCA AAGACCCCAT ATTGATTCGA ACAGGTTTGT GCCAAGCGGT TTCAGTAATT CTTCAATGGA AATGGTGAAA GGGCCTCCAG GGACTGCTCT GACATCAAGG CAGTATTGCA ATTCCGGATA CATAGTGGAA AATGTTTCCA GCGTTTTGCG AAGATTCAGA TGGGGCCCTG CTGCCGAAGA GGCCCTTCAA AATCTCGGTT TGAGGATCGA TGCATACCAA GCAAACCAAG TTCTTAAACA GATGAATGAC TATGGAAATG CTCTTGGTTT CTTCTACTGG TTAAAAAGGC AACCTGGGTT TAAGCATGAT GGGCATACTT ATACCACTAT GGTGGGTAAT CTCGGTCGTG CTAAGCAATT TGGTGCAATA AACAAGCTCC TCGATGAGAT GGTCAGAGAC GGATGTCAGC CAAACACAGT TACATATAAT CGACTTATCC ATAGCTATGG CCGCGCCAAT TACCTGAACG AAGCTATGAA CGTGTTCAAT CAAATGCAAG AGGCTGGATG CAAACCTGAC CGTGTAACTT ACTGTACCCT TATAGACATT CATGCTAAAG CTGGATTTCT AGATATTGCC ATGGATATGT ACCAGAGAAT GCAAGCAGGA GGTCTTTCTC CGGATACTTT CACTTACAGT GTCATAATAA ACTGTCTTGG AAAAGCTGGA CATTTACCCG CTGCACACAA GCTCTTTTGT GAGATGGTTG ATCAGGGTTG TACCCCTAAC TTGGTCACAT ACAACATCAT GATGGACTTG CATGCCAAAG CGAGAAACTA TCAGAGTGCG TTGAAGCTTT ACCGTGACAT GCAAAATGCT GGGTTTGAGC CTGACAAAGT GACATACAGC ATTGTGATGG AGGTGCTTGG ACACTGTGGA TATCTCGAGG AAGCAGAGGC TGTTTTCACC GAGATGCAGC AGAAGAACTG GATTCCTGAT GAGCCAGTTT ATGGTCTTTT GGTGGATTTG TGGGGAAAAG CAGGTAATGT GGAAAAGGCG TGGCAATGGT ATCAGGCAAT GCTTCATGCT GGTCTGCTAC CTAATGTTCC TACATGCAAT TCCCTCCTTA GTACCTTCCT TAGGGTTAAC AAGATAGCTG AAGCTTATGA GTTATTACAA AACATGCTGG CACTTGGTCT ACGCCCCTCT TTGCAGACAT ACACGTTACT CTTGAGCTGT TGCACAGATG GTCGATCAAA ACTTGACATG GGTTTTTGTG GCCAGCTGAT GGCAAGCACA GGTCATCCAG CACACATGTT TCTCCTCAAG ATGCCAGCAG CGGGTCCAAA TGGCGAAAAC GTGCGCAACC ATGCGAACAA CTTCCTGGAT CTTATGCACA GCGAGGACAG GGAGAGCAAG CGAGGACTCG TGGATGCGGT GGTTGACTTT CTACACAAGT CCGGGCAAAA AGAAGAGGCG GGATCTGTTT GGGAAGTTGC TGCACAAAAG AATGTGTTTC CTGATGCGTT AAGGGAGAAA AGCTGCAGCT ACTGGCTTAT CAATCTCCAT GTAATGTCAG AGGGAACTGC AGTCACCGCG CTGTCTAGGA CTCTTGCTTG GTTCCGTAAG CAGATGTTAG TCTCAGGAAC TTTCCCTTCT CGGATTGATA TAGTAACTGG TTGGGGAAGA CGTAGTAGAG TCACCGGCAC ATCAATGGTG AGACAAGCAG TTGAAGAGCT TCTCAACATC TTTGGTTCAC CGTTTTTCAC GGAGAGTGGA AACTCGGGTT GTTTCGTTGG ATGCGGAGAG CCTCTCAACA AATGGTTGCT GCAGTCTCAT GTTGAGAGGA TGCATTTGCT GTGAGTTTTG TATCACAATT TAGGC |
| Length | 2625 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7624237.. 7626859 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G18900.3 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg490411 | ABC transporter 1 |
| 5.83095 |
Ahg494585 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 7.14143 |
Ahg481404 | AFG1-like ATPase family protein |
| 12.2474 |
Ahg934499 | SOUL heme-binding family protein |
| 13.784 |
Ahg479237 | HY5-homolog |
| 14 |
Ahg471803 | Protein of unknown function (DUF1712) |
| 14.1774 |
Ahg932059 | B-box zinc finger family protein |
| 16.9411 |
Ahg331043 | zinc knuckle (CCHC-type) family protein |
| 17.2337 |
Ahg950977 | Per1-like family protein |
| 21.5407 |
Ahg477673 | glyceraldehyde-3-phosphate dehydrogenase C subunit 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|