Detail



ID : Ahg921003

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921003|scaffold_102284.1
Sequence
CTTCTCCAAA TTTCCGAAGC AAATGTCCGC CGACACAGGA CCCGCCTCCG GCGACTCAGC TGGTTTGCCC AACGGCCTCG TAAGCCATGG TGACTCTAAG ACACGGCGCG TATACGAAAC AGCTCGATCT CTGCATTCCG GTGCTGTGAA AGATCTTCTA TCTCTCGGGG TCTGCGAGAG ATGTATTTTC CGATTGGTAG CCGTCGAGGC TTTTGATTCC GATATTTCTT CAGTCTCGAC TTCAACTCTT CACAGTTGGC TCAAATCCGG TGATGGTGAA ACTGGTTCAT CGGAATCTAG CTGTTCCAGA ATCTGCATTG TTTGTTTAGG TATATTGCAG TTCGTTTTTT CCGATGCCAA AAAAGAGCTG GTGAAATCGG ATTCTAGTAG TGATTACGTT TCAAGGATAA CGGACTTGGT GAAGCAGGAT CGTCATGAGT TCGATAGCTT TGGTCTTGAA GTCTCTGTGC CATCAACTAT CATGGAGAAT GAACGTGCAC TCTTGTCATA CCTTAAAGGA AAGTATAGCA CCGAAGTTTG GCTGCAACGC GACAAATTTT CTGTAAAGGA TGCTTTGAAA GTTCTACTCT TGGATCAACT TAAAGCATCG TTGGGCGCTG AATCAGATTC AAGCTCTTTT CACATCCGTT TGACATACAC TAAAGCATCA GACGAGGCTC AGGGTGCTTC TGAAACAACG CATGAAAGTA AGAGGAGGAA AACAGACGCA GAGAATGGAT CAAACTGTAT TTCCGAGAAT TCATTTGAAA AGGTGTATGA ACCATGCATC TTTTCAGTTC ATTGCAACAG GATGCCTATC TTTTTTAGTG GGAGATACTT TAAATACTCC AGAAATGTTA GTCAATCCCG ATGGATTATT GATGATGAAA GAATGGGCGA AGCGTCTGTT GAGGAGATAC TTGGCGGAAA CATTCTTCCA GCATGCCTTG GGGATTCGTA CAAGTTCCAC GCAGCTGGCA GAGAAGATAT TGATGTACGA ATGTTGGGTT CAGGTAGACC TTTCTTGATC GAGGTTCAGA ATTCTCGCCA GTGCCCGTCT GAACAATCAT TGAAGGAAGT CGAAGAAAAG ATAAACAACT CAGAGAAAAA ACTAGTCGGA GTAAAAGACC TTAAATGTAT CGGAAGTCAG TGTTGGGCAA TGATGCGTGA AGGAGAAGCA GAGAAGCAGA AGCAGTATGT TGCACTTGTA TGGATTTCTC GTCCACTTGA AGAGAAAGAC TTCAACTCAG TTTCTTCCCT GAAAGAATTG AAAATCTTGC AGAAGACACC AGTAAGAGTG CTTCACCGAC GAAGTCCATT GGATCGTGAA AAGATTATAC ATTGGATGAA AATTGAAAAG ATAAAAGGAC ACGCTCACTA CTTTCTATTG CATCTGTGCA CCCAGGCTGG AACATACATC AAAGAATTTG TTCATGGAGA TCTTGGTCGT ACCACTCCCA GCATGGGATC AATTTTAGGG TGCAGAGCGG AGATAATACA ACTAGATGTG ACTGATGTGA AAATGGGCGA CTCATGAATT ATTACTAAGT AAAAGCC 
Length1557
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8330798.. 8334359
Download Sequence
A.thaliana
AGI-codeAT1G20410.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg932895 Tetratricopeptide repeat (TPR)-like superfamily protein
17.8606 Ahg340373 RING/U-box superfamily protein
26.0384 Ahg933675 poly(ADP-ribose) polymerase 2
27.1662 Ahg923591 SNARE-like superfamily protein
30.7409 Ahg496587 chromatin remodeling 24
31.9844 Ahg479498 Protein of unknown function (DUF177)
33.9117 Ahg931887 Small nuclear ribonucleoprotein family protein
34.4674 Ahg485453
35.4401 Ahg486162 P-loop containing nucleoside triphosphate hydrolases superfamily protein
38.8844 Ahg925447 RNA polymerase subunit alpha
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression