Detail



ID : Ahg496587

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496587|fgenesh2_kg.8__2403__AT5G63950.1
Sequence
ACATTCTCTT CATCTTCTTC TTCTCTCAGT CTTCTCTCCA TTTATTACAA CCGATCCTCG CGAATCACAA ACTCATCTCC AGAAAACAGT GTAACAATGG CGGAAAATAC GGCAAGCCAT AGAAGAAAAC CTCAGAGCTT GAACGATCGA CACTACAGTA TCCTCCAGGA TCTTTCTGCG CCTCCTAAAC AGCCTCCCTC TTCTTCCCAT GGAGAAGATG ACGAGACGAA GAAGTCCATG ATTAAGCTTG CTGGACGACG TCGTCTTTGC AAGGCCTTGC CAAAGGAAGA CGTTGAAGAT GGATATGACG ATCCTGATTT GGTTGATTTC GATTCCCCAG TTAAAGGAGA TACATCAGTA GAGAGCGCTG GAGCTGGGAA CAAATTCACA TCTTGGGATC AATCAAAGGA AGCTAACACA GAGTTGGCTG GCGAGCCTAA CTTTTCGATA ATCACAGACT TTAGCTCGCC CTCACCTCAG TTGAAGCAAA ACGAGGAAAT GCAAGGTGAT GGAGGAAGGA ACGAGATCAT GGATATTTTG GATGATTTGA CCTCCAAGCT TGGGACAATG TCGATTCAGA AGAAGAAAGA TAACCAAAGC AATGATTTTG ATGGTGGTGG AGTGAAGAGC CGTGTTGATA AATTTGATTT TGAGGATGCC AAATCCTCAT TTTCCTTGAT TTCGGATCTA TCTGAGTCCT CACCAGATGT GGGAACCACA TGTAGTGCTG GCGTTAATAG TCTCAAGGAC AAGCAAGGCA ACGCTGGTTT TGCCATCCGG GAAGAGAAAA CTAGTAATGA GATTTCAAGG GAATGGGAAG AAAGAATTTC GGATGTTGGA AAGCAAAACT CATATTCTGG TCGGCACTTT GATGATAACT CTGAAGATAA TAGGCAGGGA TACAATCTTG ACCGTGGGAA GAGCCAACGC AAGGAAGAGA AAACTATGGG CCAAAGTCTG AAGACGACTA GACACATAGA GGTAAGTGAG AAGCTAAGAA CAGTCGGAAG GTCTAATGCC GCCAAGCTAA GAGACTTAGA CAAGGATGAT GATGATGACT GTGTCATTTT GTCCGGGAAA AAGGCGGCTG AAATGAAAAT TCATCATGAA AAGCCTAAAA AGCCAGCTCG GTCTTACAAT ACCGAAAGAC ATGGTTATGA TGAGAGATCG TTGGAGGATG AAGGGTCTAT CACTTTAACT GGCCTCAAAT TGTCTTACAC ATTACCTGGA AAGATTGCAA CAATGTTATA TCCACATCAG AGGGATGGGT TGAAGTGGCT TTGGTCATTG CATACCCAAG GGAAAGGTGG AATACTTGGA GATGATATGG GTTTAGGTAA AACTATGCAG ATTTGTAGTT TTCTTGCTGG TTTGTTCCAC TCCAAATTGA TCAAGCGTGC TCTGGTAGTG GCCCCAAAAA CCTTGCTGCC TCACTGGATG AAAGAATTAG CTACCGTGGG ACTTTCAAAA ATGACTAGGG AATACTACGG TACTTCTACG AAAGCCCGGG AATATGATCT CCACCACATT CTGCAGGGTA AAGGTGTCCT TCTAACAACC TATGATATTG TGCGGAACAA TACAAAGGCT TTGCAAGGTG ACGACCATTA TACTGATGAG GATGATGAAG ATGGAATCAA ATGGGACTAC ATGATTCTGG ACGAGGGACA TCTTATTAAG AACCCCAACA CACAAAGGGC CAAGAGTTTG CTTGAGATCC CAAGTTCTCA CCGTATTATA ATAAGTGGTA CACCAATCCA GAACAATCTC AAGGAACTGT GGGCTCTCTT CAACTTCAGC TGCCCTGGGC TACTCGGTGA CAAGAATTGG TTTAAGCAGA ATTATGAGCA TTACATTCTT CGTGGAACTG ACAAAAATGC TACTGATAGA GAACAGAGGA TAGGCTCAAC AGTAGCAAAG AACTTGAGGG AGCATATTCA ACCTTTCTTC TTGCGGCGCC TTAAGAGTGA AGTCTTCGGT GATGATGGTG CAACCTCCAA ACTTTCAAAG AAGGACGAAA TTGTTGTATG GTTACGGTTA ACAGCTTGCC AGAGGCAATT ATATGAAGCT TTCTTAAACA GTGAAATTGT TCTGTCAGCT TTTGATGGTT CACCTCTAGC AGCTCTAACG ATTCTGAAGA AAATATGTGA CCACCCGCTT CTCTTAACTA AGAGGGCTGC TGAGGATGTC CTCGAAGGAA TGGATTCAAC ATTAACACCA GAAGAAGCAG GCGTGGCTGA GAGATTGGCT ATGCATATAG CGGACAATGT GGATACAGAT GATTTTCAGA CCAAGAATGA CAGTATCTCT TGCAAATTGT CATTTATCAT GTCGCTACTG GACAATTTAA TTCCAGAGGG GCACCGTGTT CTAATCTTCT CCCAGACACG CAAGATGCTT AATCTCATTC AGGATTCTCT TACCTCCAAC GGTTATAGTT TCTTGCGAAT TGATGGTACA ACAAAAGCCC CTGACAGATT GAAGACTGTT GAAGAATTTC AAGAAGGTCA TGTGGCTCCT ATATTTCTCT TGACATCTCA AGTTGGTGGT CTCGGCCTTA CTCTGACTAA GGCAGACCGT GTGATTGTGG TGGACCCTGC CTGGAATCCA AGCACGGACA ACCAGAGTGT TGATCGAGCA TATAGAATTG GGCAGACGAA GGATGTCATT GTGTATAGGT TAATGACCTC AGCAACTGTT GAAGAAAAGA TATACAGAAA GCAGGTATAC AAGGGAGGAT TGTTTAAAAC TGCAACTGAG CATAAAGAAC AAATCCGCTA CTTCAGCCAG CAGGACCTTC GAGAACTTTT TAGTCTTCCC AAGGGAGGCT TCGATGTATC ACCTACACAA CAGCAACTAT ATGAAGAGCA CTATAACCAG ATCAAACTAG ATGAAAAACT GGAATCCCAT GTAAAGTTTC TTGAAACCCT TGGTATAGCT GGAGTTAGCC ACCATAGCTT ACTTTTCTCC AAGACAGCTC CTATCCAAGC GATACAAAAA GATGAAGAAG AAGAAATAAG GAGAGAAACA GCATTGTTCT CGGGACGCCC ATCAGCAAGT ATTTCACAAG ACACCGTCAT CAATGGGGCT GACTATGCTT TCAAGCCAAA GGATGTGAAT TTGGACAAGA AAATCAACAT TTCCCCAATC GATGACAAGG AATTGTCGGA AAGCGAAATT AAAGCAAGAC TCAATCGTTT GACGATGTTA TTACAAAACA AGGATACGGT CTCAAGGCTA CCTGATGGAG GAGCAAAAAT CCAGAAGCAG ATTGCTGAAT TGACTCGAGA ACTGAAAGAC TTGAAAGCAG CAGAAAGGAT CAATATGCCT CAAGTTATTG ACTTGGAGGA GGATATAAGT CAGAAGATGC ACAAAGGATT GAATCTGTAG AGTAAGATAC AAGTCAAGGT GCAAGAAAAG CAAACGACCA TCATTGCAAC ACTTGTGGTT TTTTTGTTCC TTAATCTAAT TTGGTTTTGT TGAATTGATA AGTCAATTAC CATATGACTT GCTGCAAAGA AGTATGCCAA GCCAGATTTC ATCTTTTTCA AACCCAAACT TTAATCCG 
Length3568
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19970363.. 19977030
Download Sequence
A.thaliana
AGI-codeAT5G63950.1
Descriptionchromatin remodeling 24
TAIR curator summary
Alias[CHR24][chromatin remodeling 24]
Gene coexpression
MR
MR Locus Description
3 Ahg927678 UDP-glucose 6-dehydrogenase family protein
4.24264 Ahg488768 TCP-1/cpn60 chaperonin family protein
8.3666 Ahg492483 PHD finger protein-related
9.16515 Ahg325766 CCCH-type zinc fingerfamily protein with RNA-binding domain
9.27362 Ahg489803 cytosolic invertase 2
9.43398 Ahg930934 replication protein A 1A
9.94987 Ahg326041 structural maintenance of chromosomes 5
11.0454 Ahg483048 ABC2 homolog 9
11.225 Ahg938693 Glycosyl transferase family 4 protein
18.5203 Ahg495769 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression