Detail



ID : Ahg921142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921142|scaffold_102423.1
Sequence
CCCTGAACCG TTTTTCTCTC ATGTTCCTAT GCTTTTACCC TTGCCACGTA CCTATCATGA GTCGCCTTTC TCCGGCCACC GGAATCTCTT CCCGCCTCCA CTGCTCCGTT GATTTGAGTT CCGATGGACG ATTACTTCCG TTCGGGTTCG GATTTCGGAG AAACGATGTC CCGTTTAAAC GCCGCTTGAG ATTTGTGATC AGAGCGCAGC TCTCTGAGGC TTTTTCTCCT GATTTAGGTT TGGATTCTCA GGCTGTGAAA TCCCGGGATA CATCAAACTT GCCTTGGATT GGTCCAGTTC CAGGGGACAT TGCTGAGGTT GAGGCATATT GTAGAATTTT TCGATCAGCT GAGCGACTAC ATGGAGCGTT GATGGAGACA CTGTGCAACC CTTTGACTGG TGAATGTCGC GTACCCTATG ATTTCTCACC CGAGGAAAAA CCTTTGTTGG AGGACAAAAT AGTATCAGTG CTTGGTTGTA TATTATCTCT TTTAAACAAA GGAAGGAAAG AAATTCTCTC TGGGAGGTCA TCTTCTATGA ATTCATTTAA TTTGGATGAT GTTGGGGTTG CGGAGGAATC TCTTCCACCA CTTGCTGTTT TTAGAGGTGA AATGAAACGC TGTTGTGAAA GCTTACACAT TGCCCTTGAG AATTATCTGA CACCGGATGA TGAAAGAAGT GGAATTGTCT GGAGGAAATT ACAGAAGCTT AAGAATGTCT GCTACGACGC AGGTTTTCCA CGCAGTGATA ACTATCCTTG CCAAACACTT TTTGCGAATT GGGACCCTAT TTATTCGTCA GATACGAAAG AGGATATTGG TTCCTACGAG TCTGAGATTG CATTTTGGAG GGGAGGACAG GTAACCCAAG AAGGATTGAA GTGGTTAATC GAAAATGGAT TTAAAACAAT TGTTGACCTG AGAGCTGAAC ACGTGAAGGA TACATTCTAC CAGGCTGCAC TTGATGATGC AATTTCCCTT GGGAAAATTA CAGTGGTGCA AATTCCAATT GAAGTCAGGA TGGCTCCTAA AGCTGAGCAG GTCGAGCTGT TTGCTTCTAT TGTATCAGAT AGCAGCAAAA GGCCGATATA TGTTCACAGT AAAGAAGGTG TTTGGAGAAC TTCTGCGATG GTTTCTAGGT GGAAGCAGTA CATGACACGT CCAATCACGA AAGAAATTCC AGTTTCAGAA GAGTCAAAGC TTCGGGAGGT TTCTGAAACT AAGCTTGGAT TAAATGCTGT AGTATCTGGT AAGGGTGTAC CTGATGAGCA TACTGATAAA GTCTCTGAAA TCAATGAGGT TGATAGTAGA TCTGCTACGA ACCAGAGCAA AGAATCTGGA AGCATTGAGG GAGATACATC TGCATCAGAA TTTAATATGG TGAGCGATCC TCTTAAATCT CAAGTTCCAC CAGGCAATAT TTTTTCAAGA AAAGAAATGT CTAAATTTCT GAGGAGCAAA AGTATTGCTC CTGCTGGTTA TCTTAGTAAT CCGTCCAAAA AATTGGGAAC AGTGCCAACT CCGCAATTTT CATATTCTGG TGTGACAAAC GGAAACCAGA TTTTTGATAA AGATTCCATA AGAGGACTTG CGGAGACAGG AAACTCCAAT GGGACCGTTT TACCTACAAG TTCTCAAAGT TTAGATTTTG GCAATGGGAA GTTTTCAAAT GGAAATGTGC TTGCTTCTGA TAACACCAAC AAAAGTATAT CGGACAACAG AGGAAATGGC TTCTCTGCAG AGCCTATTGT TGTGCCTCCT AGTGATAACT TAAATCGCGC TGTAGGATCC CATTCGGTTC GAGAGTCTCA GAGAAACAAC AGTGCTTCTT CCTCGGATTC CAGTGATGAT GAAGCTGGAG CTATTGAGGG AAATATGTGT GCTTCTGCCA CTGGTGTAGT AAGGGTGCAG TCGAGAAAGA AAGCAGAGAT GTTCTTAGTC CGAACTGATG GAGTGTCTTG TACAAGGGAA AAGGTGACAG AATCCTCTCT AGCCTTCACA CATCCAAGTA CTCAACAGCA GATGCTTCTT TGGAAAACTA CCCCAAAAAC TGTCTTACTG CTGAAGAAGC TCGGGCAAGA ATTGATGGAG GAAGCTAAAG AGGCTGCCTC TTTCTTGTAT CACCAAGAGA ATATGAATGT TCTGGTTGAA CCTGAGGTGC ATGATGTATT TGCCAGGATT CCAGGGTTTG GCTTTGTCCA GACCTTTTAC ATTCAGGACA CGAGCGATCT CCATGAAAGG GTTGATTTTG TGGCATGCTT AGGGGGGGAT GGGGTGATAT TACATGCATC AAACTTGTTC AAAGGAGCTG TCCCTCCCGT TGTTTCATTT AATCTGGGGT CCCTTGGATT TCTCACTTCA CATCCATTTG AGGACTTCAG GCAAGACCTC AAACGAGTCA TCCATGGGAA TAACACGCTA GATGGGGTTT ATATAACTCT TCGAATGCGT CTTCGTTGCG AAATCTATCG TAAAGGCAAA GCAATGCCTG GTAAAGTGTT TGATGTTCTG AACGAGATTG TTGTTGATCG AGGATCCAAC CCATACCTTT CTAAGATCGA ATGTTATGAG CACGACCGTC TTATCACAAA GGTACAAGGT GATGGAGTTA TAGTAGCCAC TCCTACAGGA AGTACTGCTT ATTCTACAGC AGCAGGAGGT TCCATGGTGC ATCCAAACGT TCCTTGCATG CTGTTCACTC CAATCTGCCC ACATTCCCTG TCGTTCAGAC CAGTTATACT TCCGGATTCT GCAAAACTCG AGTTAAAGAT TCCAGATGAT GCCCGAAGCA ATGCATGGGT TTCGTTTGAT GGAAAGAGGA GGCAACAACT TTCAAGGGGA GATTCGGTGA GAATATATAT GAGCCAACAT CCACTCCCAA CTGTCAACAA ATCTGATCAA ACTGGTGATT GGTTTAGAAG CTTAATCCGT TGCTTAAACT GGAACGAACG TCTTGATCAA AAGGCTCTTT GATGATTGAT TGGTTCATTT AT 
Length2992
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8923050.. 8927130
Download Sequence
A.thaliana
AGI-codeAT1G21640.2
DescriptionNAD kinase 2
TAIR curator summaryEncodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.
Alias[ATNADK2][NADK2][NAD KINASE 2][NAD kinase 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg933859 beta galactosidase 9
3.74166 Ahg473532 Protein of unknown function (DUF179)
4.69042 Ahg491819 protein kinase family protein / WD-40 repeat family protein
7.48331 Ahg930354 XB3 ortholog 5 in Arabidopsis thaliana
9.11043 Ahg316788 Tetratricopeptide repeat (TPR)-like superfamily protein
11.225 Ahg482247 cellulose synthase-like D1
12.2474 Ahg472805 alpha/beta-Hydrolases superfamily protein
12.49 Ahg487264 pentatricopeptide (PPR) repeat-containing protein
12.6491 Ahg477133 Protein kinase superfamily protein
13.9284 Ahg484422 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression